Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 7.0e-113 410.6 205 100.0
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 6.6e-111 404.1 205 98.0
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 8.7e-79 297.4 204 73.0
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.6e-77 293.1 208 70.2
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 1.4e-76 290.0 203 72.9
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.8e-76 289.7 204 73.0
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 3.8e-74 282.0 204 71.1
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 1.4e-73 280.0 207 69.1
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 1.9e-73 279.6 200 70.0
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 1.9e-73 279.6 194 72.2
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.2e-72 276.9 204 71.6
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.6e-72 276.6 203 70.4
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 1.6e-72 276.6 203 70.4
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 2.7e-72 275.8 207 68.6
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.7e-72 275.8 204 71.1
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 2.7e-72 275.8 206 68.9
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 3.5e-72 275.4 207 69.1
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 6.0e-72 274.6 206 69.4
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 7.9e-72 274.2 201 67.7
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.0e-71 273.9 204 70.6
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.0e-71 273.9 203 69.5
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.3e-71 273.5 204 70.6
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 3.0e-71 272.3 206 66.0
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 5.1e-71 271.6 209 68.9
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 5.1e-71 271.6 207 68.6
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 6.7e-71 271.2 205 69.8
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 1.5e-70 270.0 199 68.3
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 4.3e-70 268.5 204 69.1
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 4.3e-70 268.5 193 70.5
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 7.4e-70 267.7 202 66.8
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 9.6e-70 267.3 196 67.3
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 9.6e-70 267.3 207 67.6
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.3e-69 266.9 203 67.5
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 2.1e-69 266.2 203 65.0
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.8e-69 265.8 203 68.0
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 8.1e-69 264.2 198 67.7
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 2.4e-68 262.7 210 65.7
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 2.4e-68 262.7 206 68.4
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 6.9e-68 261.2 195 68.7
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 6.9e-68 261.2 206 65.0
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.2e-67 260.4 206 65.5
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 1.2e-67 260.4 199 69.3
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 2.0e-67 259.6 207 65.2
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 3.4e-67 258.8 206 67.0
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 3.4e-67 258.8 203 66.5
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 4.5e-67 258.5 206 66.5
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.0e-66 257.3 197 66.5
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 1.3e-66 256.9 194 66.5
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.9e-66 255.8 152 77.6
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 2.9e-66 255.8 206 64.6
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 4.9e-66 255.0 203 66.0
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 6.5e-66 254.6 192 67.2
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 8.4e-66 254.2 200 67.0
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.5e-65 252.7 198 65.7
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 4.2e-65 251.9 202 65.3
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 4.2e-65 251.9 202 65.3
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 4.2e-65 251.9 183 69.9
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 7.1e-65 251.1 195 65.6
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 9.3e-65 250.8 194 64.9
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 1.2e-64 250.4 202 63.9
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.1e-64 249.6 183 69.4
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 6.0e-64 248.1 186 68.3
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 6.0e-64 248.1 202 63.9
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 7.9e-64 247.7 202 65.3
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.8e-63 246.5 198 64.6
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 1.8e-63 246.5 189 65.6
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 8.7e-63 244.2 200 64.5
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 8.7e-63 244.2 200 63.5
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 4.3e-62 241.9 201 66.2
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 1.6e-61 240.0 198 63.1
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.6e-61 240.0 217 60.4
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.8e-61 238.4 203 62.1
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 2.4e-60 236.1 198 62.6
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 3.1e-60 235.7 181 66.9
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 3.1e-60 235.7 197 62.9
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 3.1e-60 235.7 201 63.2
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 5.3e-60 235.0 195 62.1
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 6.9e-60 234.6 163 71.8
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 2.6e-59 232.6 178 64.6
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 7.6e-59 231.1 192 62.5
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.3e-58 230.3 196 61.2
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 2.9e-58 229.2 178 62.9
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 2.9e-58 229.2 166 69.9
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.8e-58 228.8 204 62.3
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 5.0e-58 228.4 125 84.8
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 6.5e-58 228.0 197 61.4
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 6.5e-58 228.0 166 67.5
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 6.5e-58 228.0 166 67.5
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 1.9e-57 226.5 197 59.9
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 3.2e-57 225.7 197 59.9
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 3.2e-57 225.7 197 59.9
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 2.7e-56 222.6 182 63.7
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 1.1e-54 217.2 134 75.4
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.4e-52 210.3 166 65.1
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.9e-50 202.6 153 66.7
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 5.0e-50 201.8 166 62.7
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 1.4e-49 200.3 129 70.5
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 1.3e-42 177.2 131 62.6
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 1.7e-42 176.8 144 63.9
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 5.0e-42 175.3 136 58.8
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 4.2e-41 172.2 126 64.3
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 5.7e-38 161.8 141 60.3
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 4.1e-36 155.6 129 58.9
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 1.2e-35 154.1 90 75.6
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 5.0e-34 148.7 168 45.8
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 8.0e-32 141.4 138 55.1
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 4.0e-31 139.0 187 48.7
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.8e-28 130.2 195 44.6
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.0e-23 114.4 133 51.9
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 8.3e-21 104.8 69 68.1
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 1.2e-14 84.3 127 43.3


User provided reference genes

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