Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A636T25 Lonicera japonica HOM05D001065 ORTHO05D002020 9.3e-44 179.9 94 100.0
Lj4A642G41 Lonicera japonica HOM05D001065 ORTHO05D002020 3.9e-42 174.5 94 97.9
Lj4A641G45 Lonicera japonica HOM05D001065 ORTHO05D002020 2.4e-36 155.2 78 98.7
QL09p033728 Quercus lobata HOM05D001065 ORTHO05D002020 3.1e-15 85.1 96 57.3
Dinv27281 Davidia involucrata HOM05D001065 ORTHO05D002020 5.5e-12 74.3 97 56.7
Cfa018563 Carpinus fangiana HOM05D001065 ORTHO05D002020 1.2e-11 73.2 96 55.2
Haze_17517 Corylus avellana HOM05D001065 ORTHO05D002020 2.7e-11 72.0 98 56.1
TAR376G1110 Trochodendron aralioides HOM05D001065 ORTHO05D002020 7.9e-11 70.5 97 53.6
TAR628G1385 Trochodendron aralioides HOM05D001065 ORTHO05D002020 1.4e-10 69.7 97 51.5
Lj7C345G4 Lonicera japonica HOM05D001065 ORTHO05D002020 1.8e-10 69.3 95 56.8
Dinv14648 Davidia involucrata HOM05D001065 ORTHO05D002020 3.0e-10 68.6 96 54.2
Actinidia21301 Actinidia chinensis HOM05D001065 ORTHO05D002020 1.5e-09 66.2 95 49.5
Atru.chr13.1528 Acer truncatum HOM05D001065 ORTHO05D002020 2.0e-09 65.9 94 53.2
CiPaw.15G034000 Carya illinoinensis HOM05D001065 ORTHO05D002020 4.3e-09 64.7 96 52.1
Prupe.1G492600 Prunus persica HOM05D001065 ORTHO05D002020 4.3e-09 64.7 96 49.0
CSS0047329 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D002020 1.7e-08 62.8 95 47.4
Manes.02G166500 Manihot esculenta HOM05D001065 ORTHO05D002020 2.8e-08 62.0 94 48.9
Sed0006418 Sechium edule HOM05D001065 ORTHO05D002020 3.7e-08 61.6 75 54.7
Actinidia15228 Actinidia chinensis HOM05D001065 ORTHO05D002020 8.2e-08 60.5 95 47.4
CANSAT25G2087 Cannabis sativa HOM05D001065 ORTHO05D002020 8.2e-08 60.5 95 46.3
MELO3C010503.2 Cucumis melo HOM05D001065 ORTHO05D002020 8.2e-08 60.5 73 52.1
Nitab4.5_0000322g0040 Nicotiana tabacum HOM05D001065 ORTHO05D002020 8.2e-08 60.5 95 46.3
TWI34G1002 Tripterygium wilfordii HOM05D001065 ORTHO05D002020 8.2e-08 60.5 96 50.0
GSVIVG01008831001 Vitis vinifera HOM05D001065 ORTHO05D002020 8.2e-08 60.5 97 49.5
CsaV3_4G028080 Cucumis sativus L. HOM05D001065 ORTHO05D002020 1.1e-07 60.1 73 50.7
TWI60G0950 Tripterygium wilfordii HOM05D001065 ORTHO05D002020 1.1e-07 60.1 95 47.4
Thecc.08G129700 Theobroma cacao HOM05D001065 ORTHO05D002020 1.4e-07 59.7 95 51.6
Lalb_Chr08g0241261 Lupinus albus HOM05D001065 ORTHO05D002020 2.4e-07 58.9 96 46.9
Potri.002G080600 Populus trichocarpa HOM05D001065 ORTHO05D002020 2.4e-07 58.9 94 50.0
MD00G1041900 Malus domestica HOM05D001065 ORTHO05D002020 3.1e-07 58.5 96 46.9
MBI06_g35523_MAGBIO Magnolia biondii HOM05D001065 ORTHO05D002020 4.1e-07 58.2 98 48.0
CSS0004246 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D002020 5.3e-07 57.8 94 45.7
Sed0027165 Sechium edule HOM05D001065 ORTHO05D002020 5.3e-07 57.8 73 52.1
Gorai.009G284000 Gossypium raimondii HOM05D001065 ORTHO05D002020 6.9e-07 57.4 94 50.0
Sabra05G0136800 Salix brachista HOM05D001065 ORTHO05D002020 6.9e-07 57.4 94 48.9
CSS0034416 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D002020 9.1e-07 57.0 95 49.5
CSS0037838 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D002020 9.1e-07 57.0 95 49.5
Gohir.D05G271100 Gossypium hirsutum HOM05D001065 ORTHO05D002020 9.1e-07 57.0 94 48.9
RcHm_v2.0_Chr6g0296331 Rosa chinensis HOM05D001065 ORTHO05D002020 9.1e-07 57.0 95 45.3
COL.COLO4_07483 Corchorus olitorius HOM05D001065 ORTHO05D002020 1.2e-06 56.6 94 50.0
Nitab4.5_0009546g0010 Nicotiana tabacum HOM05D001065 ORTHO05D002020 1.5e-06 56.2 95 44.2
Gohir.D06G123350 Gossypium hirsutum HOM05D001065 ORTHO05D002020 2.0e-06 55.8 94 48.9
MD00G1030000 Malus domestica HOM05D001065 ORTHO05D002020 7.7e-06 53.9 96 42.7
Sopen06g020240 Solanum pennellii HOM05D001065 ORTHO05D002020 7.7e-06 53.9 95 44.2


User provided reference genes

Program Settings