Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A556G6 Lonicera japonica HOM05D005623 ORTHO05D007130 3.4e-55 218.0 104 100.0
Lj4A313G21 Lonicera japonica HOM05D005623 ORTHO05D007130 2.7e-44 181.8 102 87.3
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 8.1e-41 170.2 102 81.4
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 2.4e-40 168.7 101 79.2
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 4.0e-40 167.9 102 78.4
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 5.3e-40 167.5 102 78.4
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 5.3e-40 167.5 102 80.4
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 5.3e-40 167.5 102 80.4
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 5.3e-40 167.5 102 79.4
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 6.9e-40 167.2 102 79.4
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 9.0e-40 166.8 102 78.4
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 9.0e-40 166.8 102 81.4
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 2.6e-39 165.2 102 80.4
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 3.4e-39 164.9 102 79.4
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 4.5e-39 164.5 102 79.4
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 5.8e-39 164.1 102 77.5
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 7.6e-39 163.7 102 77.5
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 7.6e-39 163.7 102 77.5
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 9.9e-39 163.3 102 76.5
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 1.3e-38 162.9 102 79.4
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 2.9e-38 161.8 103 76.7
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 2.9e-38 161.8 102 77.5
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 3.8e-38 161.4 102 78.4
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 3.8e-38 161.4 102 75.5
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 4.9e-38 161.0 102 77.5
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 4.9e-38 161.0 102 75.5
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 6.4e-38 160.6 102 75.5
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 1.1e-37 159.8 102 75.5
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.1e-37 159.8 102 77.5
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 1.4e-37 159.5 101 75.2
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 1.4e-37 159.5 102 76.5
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 1.9e-37 159.1 102 74.5
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.2e-37 157.9 102 76.5
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 4.2e-37 157.9 102 74.5
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 7.1e-37 157.1 102 75.5
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 7.1e-37 157.1 102 75.5
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 1.2e-36 156.4 102 73.5
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 1.2e-36 156.4 102 73.5
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 1.2e-36 156.4 102 72.5
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 1.2e-36 156.4 102 72.5
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 1.2e-36 156.4 102 76.5
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 2.7e-36 155.2 102 74.5
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.7e-36 155.2 102 74.5
Psat7g019600 Pisum sativum HOM05D005623 ORTHO05D007130 2.7e-36 155.2 102 71.6
Sabra06G0118200 Salix brachista HOM05D005623 ORTHO05D007130 2.7e-36 155.2 102 75.5
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 3.5e-36 154.8 102 75.5
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 4.6e-36 154.5 102 72.5
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 4.6e-36 154.5 102 72.5
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 4.6e-36 154.5 102 72.5
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 4.6e-36 154.5 102 75.5
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 6.0e-36 154.1 102 75.5
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 7.9e-36 153.7 102 73.5
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 7.9e-36 153.7 102 73.5
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 1.0e-35 153.3 102 73.5
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 1.0e-35 153.3 102 71.6
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 1.3e-35 152.9 101 73.3
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 1.3e-35 152.9 102 74.5
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 1.8e-35 152.5 102 71.6
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 2.3e-35 152.1 102 74.5
ClCG03G015820 Citrullus lanatus HOM05D005623 ORTHO05D007130 3.9e-35 151.4 102 73.5
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 3.9e-35 151.4 102 70.6
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 6.7e-35 150.6 102 70.6
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 6.7e-35 150.6 118 64.4
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 6.7e-35 150.6 102 71.6
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 8.7e-35 150.2 102 72.5
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 8.7e-35 150.2 102 70.6
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 1.1e-34 149.8 102 71.6
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 1.1e-34 149.8 102 71.6
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 1.5e-34 149.4 102 69.6
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 1.5e-34 149.4 102 70.6
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 1.9e-34 149.1 102 72.5
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 1.9e-34 149.1 102 69.6
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 1.9e-34 149.1 102 69.6
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.5e-34 148.7 102 70.6
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 3.3e-34 148.3 102 69.6
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 3.3e-34 148.3 102 69.6
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 4.3e-34 147.9 102 71.6
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 4.3e-34 147.9 102 70.6
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 7.4e-34 147.1 102 69.6
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 7.4e-34 147.1 102 66.7
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 9.6e-34 146.7 102 72.5
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 2.1e-33 145.6 102 71.6
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 2.8e-33 145.2 102 69.6
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 6.2e-33 144.1 102 69.6
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.1e-32 143.3 102 66.7
Nitab4.5_0000713g0170 Nicotiana tabacum HOM05D005623 ORTHO05D007130 1.1e-32 143.3 102 67.6
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 2.4e-32 142.1 102 67.6
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 2.4e-32 142.1 102 67.6
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 2.4e-32 142.1 102 67.6
Nn1g05571 Nelumbo nucifera HOM05D005623 ORTHO05D007130 9.0e-32 140.2 102 68.6
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 1.5e-31 139.4 102 66.7
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 1.5e-31 139.4 102 66.7
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 8.4e-30 133.7 102 67.6
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 5.7e-26 120.9 101 59.4
PSO210G4788 Papaver somniferum HOM05D005623 ORTHO05D007130 2.1e-25 119.0 105 61.9
vmacro00758 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 4.8e-25 117.9 74 73.0
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 8.2e-25 117.1 102 55.9
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 1.0e-22 110.2 102 53.9
CBR_g19773 Chara braunii HOM05D005623 ORTHO05D007130 2.5e-21 105.5 102 47.1
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 2.7e-20 102.1 70 71.4
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 6.1e-20 100.9 102 52.0
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 1.8e-19 99.4 71 70.4
SEGI_25582 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 2.2e-17 92.4 77 57.1
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 6.3e-17 90.9 102 52.0
Glyma.08G030000 Glycine max HOM05D005623 ORTHO05D007130 1.4e-16 89.7 64 65.6
PGR102G1575 Punica granatum HOM05D005623 ORTHO05D007130 4.1e-16 88.2 57 68.4
C03p64460 Brassica napus HOM05D005623 ORTHO05D007130 2.6e-15 85.5 58 67.2
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 1.3e-14 83.2 99 43.4
PRCOL_00000211 Prasinoderma coloniale HOM05D005623 ORTHO05D007130 1.1e-13 80.1 101 38.6
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 3.2e-13 78.6 46 82.6


User provided reference genes

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