Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A485G7 Lonicera japonica HOM05D007893 ORTHO05D048457 6.2e-51 203.8 98 100.0
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 3.2e-07 58.5 85 35.3
Thhalv10003592m.g Eutrema salsugineum HOM05D005764 ORTHO05D006600 7.2e-07 57.4 81 33.3
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 1.2e-06 56.6 85 37.6
Nitab4.5_0009549g0030 Nicotiana tabacum HOM05D007893 ORTHO05D048457 2.7e-06 55.5 76 38.2
CARHR275790 Cardamine hirsuta HOM05D005764 ORTHO05D006600 3.6e-06 55.1 79 34.2
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 4.7e-06 54.7 87 37.9
QL03p035978 Quercus lobata HOM05D026851 ORTHO05D030527 4.7e-06 54.7 113 31.0
TPR.G30250 Trifolium pratense HOM05D000855 ORTHO05D008530 4.7e-06 54.7 81 39.5
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 6.1e-06 54.3 84 33.3
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 6.1e-06 54.3 86 34.9
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 6.1e-06 54.3 87 37.9
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 8.0e-06 53.9 85 36.5
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 8.0e-06 53.9 87 37.9
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 8.0e-06 53.9 87 36.8
HPP92_007727 Vanilla planifolia HOM05D007383 ORTHO05D009254 8.0e-06 53.9 81 34.6


User provided reference genes

Program Settings