Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-95 350.1 171 100.0
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-79 299.3 171 87.7
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-68 260.8 169 74.0
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 3.5e-65 251.9 147 78.9
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-61 240.4 138 80.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-44 180.6 95 83.2
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-35 151.0 171 43.9
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-34 148.7 171 42.1
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-33 146.7 172 43.0
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-33 146.7 182 42.9
Lj2C883T0 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-32 141.0 173 41.0
Lj1C816T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-30 134.8 78 88.5
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-29 134.0 161 42.9
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-29 133.7 91 65.9
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-29 131.7 138 47.8
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-29 131.7 138 47.8
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-29 131.7 138 47.8
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-29 131.0 129 48.8
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-28 130.2 129 48.8
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-28 129.8 91 64.8
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-28 129.0 129 48.1
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-28 128.6 102 52.9
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-28 128.6 91 65.9
Lj1E569T0 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-28 127.5 70 77.1
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-28 127.5 91 63.7
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-27 126.7 129 48.1
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-27 126.7 197 39.1
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-27 125.9 196 36.7
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-27 125.9 111 48.6
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-27 125.6 128 45.3
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-26 123.6 103 54.4
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-25 120.6 77 67.5
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-25 120.6 138 44.9
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-25 118.6 161 39.8
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-25 118.2 176 36.4
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-24 116.3 91 54.9
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-24 115.5 100 54.0
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-24 115.5 91 53.8
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-24 115.2 91 53.8
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-23 112.1 112 48.2
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-23 111.7 163 39.3
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-22 110.2 69 66.7
Lj1A171T29 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-21 106.3 107 43.9
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-20 101.7 183 33.3
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-19 100.1 115 46.1
Lju1074A3T39 Lonicera japonica HOM05D000176 ORTHO05D002183 9.3e-18 94.4 100 51.0
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-17 92.4 84 47.6
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-17 92.4 126 37.3
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-17 91.3 93 46.2
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 1.0e-16 90.9 70 57.1
Lj6C556T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-16 90.1 145 39.3
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-15 86.7 77 50.6
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 3.3e-15 85.9 131 33.6
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-15 84.7 88 45.5
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-14 84.0 142 38.0
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-14 83.2 70 52.9
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-12 77.4 68 45.6
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-10 70.5 169 29.0
Lj4C483T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-10 69.7 68 44.1
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-10 68.6 68 42.6
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-10 68.6 68 42.6
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.3e-10 67.8 152 27.6
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.2e-09 67.4 152 27.6
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.2e-09 67.4 152 27.6
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 67.0 68 39.7
Lju170A10G17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 67.0 67 40.3
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-09 66.2 59 44.1
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-09 65.9 66 40.9
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-09 65.1 61 44.3
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 5.1e-08 62.0 137 26.3
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 6.7e-08 61.6 106 28.3
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-07 60.5 136 28.7
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-07 59.3 86 40.7
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 5.7e-07 58.5 90 31.1
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 9.7e-07 57.8 51 45.1
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 9.7e-07 57.8 66 33.3
Lj1A609T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-06 56.6 52 44.2
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-06 56.2 81 40.7
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 3.7e-06 55.8 134 26.1
Lj2A762T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-06 55.1 50 54.0


User provided reference genes

Program Settings