Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 5.4e-256 887.1 433 100.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 2.5e-168 595.9 427 69.3
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.8e-166 589.7 427 68.6
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 8.9e-158 560.8 428 65.2
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.3e-156 557.0 428 64.7
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 8.3e-156 554.3 431 63.8
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 4.1e-155 552.0 419 63.7
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 4.6e-154 548.5 428 64.5
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 5.1e-153 545.0 428 63.8
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 8.6e-153 544.3 475 60.4
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.5e-152 543.5 421 63.4
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 5.6e-152 541.6 419 65.6
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.2e-151 540.4 456 61.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 2.8e-151 539.3 403 65.5
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 3.6e-151 538.9 426 63.8
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 3.1e-150 535.8 431 63.1
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 4.0e-150 535.4 403 65.0
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.7e-148 530.0 422 63.0
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 2.2e-148 529.6 425 63.3
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 4.1e-147 525.4 437 62.7
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 7.1e-147 524.6 428 61.4
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 2.1e-146 523.1 421 61.8
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 2.1e-146 523.1 443 61.2
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 7.8e-146 521.2 427 61.4
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 1.9e-144 516.5 423 61.5
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 9.5e-144 514.2 425 59.5
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.4e-142 509.6 429 59.7
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 2.4e-142 509.6 431 61.5
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 8.9e-142 507.7 424 58.5
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.2e-141 507.3 409 61.9
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 2.6e-141 506.1 444 59.7
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.9e-140 501.9 454 58.8
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.9e-140 501.9 454 58.8
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 6.4e-140 501.5 427 58.1
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.4e-139 500.4 422 59.7
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 1.9e-139 500.0 422 61.1
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 3.5e-138 495.7 431 58.9
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 3.5e-138 495.7 425 60.7
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 1.0e-137 494.2 427 60.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 1.7e-137 493.4 425 60.0
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 3.9e-137 492.3 429 59.0
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 3.9e-137 492.3 427 58.1
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 8.7e-137 491.1 427 58.8
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.9e-136 490.0 544 48.7
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 4.3e-136 488.8 421 58.2
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 1.3e-135 487.3 432 57.4
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 1.3e-135 487.3 428 57.0
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 3.6e-135 485.7 422 57.6
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 3.6e-135 485.7 433 58.4
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 3.6e-135 485.7 431 58.2
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 6.2e-135 485.0 422 57.8
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.4e-134 483.8 433 58.9
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 3.4e-133 479.2 419 57.5
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 4.4e-133 478.8 425 57.6
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 4.4e-133 478.8 432 56.9
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.3e-132 477.2 432 55.8
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.7e-132 476.9 424 57.8
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 4.9e-132 475.3 370 62.2
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 5.4e-131 471.9 426 56.1
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 7.1e-131 471.5 439 55.6
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 9.3e-131 471.1 430 54.7
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.2e-130 470.7 464 55.2
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 2.7e-130 469.5 417 58.8
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 6.0e-130 468.4 452 53.1
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 6.0e-130 468.4 427 57.8
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.7e-129 466.8 429 56.9
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 2.3e-129 466.5 420 57.4
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.6e-127 459.1 432 55.6
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 4.8e-127 458.8 419 56.1
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.4e-126 457.2 425 56.0
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.2e-125 454.1 426 54.7
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 3.4e-125 452.6 331 65.6
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 9.9e-125 451.1 381 62.5
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 8.4e-124 448.0 436 53.0
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 2.3e-121 439.9 426 53.3
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 5.6e-120 435.3 382 58.6
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 8.1e-119 431.4 416 53.8
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 2.4e-118 429.9 426 51.9
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 1.9e-115 420.2 367 58.0
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 7.1e-115 418.3 425 52.5
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 2.1e-114 416.8 445 50.3
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 3.0e-113 412.9 394 55.8
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.5e-112 410.6 344 61.9
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.4e-110 403.3 427 51.5
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 6.9e-110 401.7 335 59.7
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 7.6e-109 398.3 454 48.7
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 1.7e-108 397.1 385 53.5
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 2.1e-106 390.2 435 48.7
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 1.2e-101 374.4 428 47.0
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 2.3e-97 360.1 361 54.8
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 6.3e-95 352.1 358 53.4
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.6e-90 337.4 414 44.7
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.4e-86 324.3 439 41.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.4e-86 323.6 305 57.0
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.1e-86 323.2 432 42.8
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.0e-85 320.5 340 52.9
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.3e-79 301.2 352 45.7
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.0e-76 291.6 304 48.4
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 6.3e-63 245.7 161 69.6
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.4e-57 228.0 233 54.5
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 9.2e-54 215.3 234 52.6
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.7e-52 211.1 194 51.5
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 8.9e-49 198.7 397 32.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 2.8e-42 177.2 230 40.9
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.1e-33 148.7 160 53.1
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 8.9e-33 145.6 159 48.4
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 8.1e-26 122.5 93 63.4
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.6e-21 108.2 159 45.9
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 2.2e-15 87.8 70 60.0
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.9e-11 74.7 195 31.3
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 9.6e-11 72.4 92 47.8
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.4e-09 67.8 61 59.0
BolC8t49566H Brassica oleracea HOM05D040593 ORTHO05D033422 7.1e-06 56.2 37 64.9


User provided reference genes

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