Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 5.0e-193 677.6 333 100.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.4e-157 558.1 336 80.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.1e-152 543.5 337 79.8
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.1e-151 539.3 337 77.4
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.1e-147 526.9 335 76.1
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.4e-147 526.6 337 75.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.4e-147 525.8 324 76.5
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.3e-147 523.9 332 77.1
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 9.3e-147 523.9 335 75.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 2.7e-146 522.3 330 77.3
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 3.5e-146 521.9 335 75.2
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 6.0e-146 521.2 336 74.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.9e-145 518.5 326 77.9
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.6e-145 517.7 337 73.9
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 6.6e-145 517.7 324 77.8
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 6.6e-145 517.7 332 77.7
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 8.7e-145 517.3 337 74.2
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.7e-145 517.3 334 75.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.5e-144 516.5 326 77.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.3e-144 515.4 337 75.4
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.3e-144 515.4 337 74.2
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 3.6e-143 511.9 336 73.8
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.6e-143 511.9 328 75.3
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-142 510.4 335 73.4
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.1e-142 510.4 329 75.1
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.6e-141 505.8 328 74.7
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 5.8e-141 504.6 332 74.7
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.2e-139 498.8 315 75.2
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 3.2e-139 498.8 335 73.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.2e-138 496.9 336 72.3
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.1e-138 496.1 335 71.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.7e-138 495.7 333 73.3
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 3.5e-138 495.4 334 74.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 4.6e-138 495.0 330 72.7
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 3.9e-137 491.9 327 73.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 3.9e-137 491.9 332 71.7
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 5.1e-137 491.5 330 73.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.1e-136 490.3 325 72.9
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.1e-136 490.3 334 73.7
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.1e-136 490.3 334 74.0
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.5e-136 490.0 335 72.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.9e-136 489.6 335 71.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.4e-136 487.6 327 74.9
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 7.4e-136 487.6 330 71.8
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 9.6e-136 487.3 326 74.2
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 2.8e-135 485.7 317 73.5
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.1e-134 483.8 334 70.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 4.0e-134 481.9 321 73.8
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 5.3e-134 481.5 337 70.0
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 6.9e-134 481.1 335 69.9
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 2.0e-133 479.6 325 72.3
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 3.4e-133 478.8 330 71.8
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 9.9e-133 477.2 330 70.6
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.2e-132 476.1 331 70.4
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.2e-132 476.1 324 71.6
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.9e-132 475.7 327 73.4
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.1e-131 473.8 325 72.0
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.9e-131 473.0 307 74.9
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 7.9e-130 467.6 329 71.7
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 5.1e-129 464.9 314 71.3
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 8.7e-129 464.2 331 69.5
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.9e-128 463.0 338 68.6
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 5.6e-128 461.5 314 70.7
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.7e-127 458.8 316 69.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.4e-126 456.1 315 71.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 3.1e-126 455.7 332 68.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 5.8e-125 451.4 325 67.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 5.8e-125 451.4 325 67.1
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.3e-124 450.3 325 66.8
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.3e-124 450.3 325 66.8
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.9e-124 449.1 322 67.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.8e-124 448.7 331 67.7
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 8.4e-124 447.6 344 64.5
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.4e-123 446.8 325 66.5
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.5e-123 446.0 325 65.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 4.2e-123 445.3 324 66.4
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 4.2e-123 445.3 321 66.7
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 9.3e-123 444.1 321 67.0
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.2e-122 443.7 330 67.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.1e-122 443.0 325 65.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 9.7e-120 434.1 322 67.1
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 9.7e-120 434.1 316 68.4
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.6e-119 433.3 329 64.4
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 8.2e-119 431.0 315 68.9
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.7e-116 423.3 325 64.3
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-115 420.6 325 66.8
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.2e-115 419.1 336 64.6
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.1e-114 416.4 316 63.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.7e-114 416.0 307 64.8
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 3.8e-100 369.0 307 58.3
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 6.5e-100 368.2 300 60.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.0e-97 360.9 311 60.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.9e-93 345.1 285 61.8
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.8e-92 342.4 209 78.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 7.2e-83 311.6 307 53.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.0e-80 303.5 202 72.3
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.6e-80 303.1 309 52.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.3e-79 298.5 305 51.5
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.3e-76 290.8 214 68.7
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 5.0e-76 288.9 199 70.4
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.1e-75 287.7 232 61.6
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.0e-72 276.9 163 81.0
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.0e-64 250.4 176 67.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.9e-60 236.1 161 67.7
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.5e-59 233.4 134 79.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-57 227.3 157 72.0
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.0e-52 211.5 257 50.6
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.9e-51 207.2 284 44.4
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.5e-45 186.4 130 73.1
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.6e-43 178.3 131 64.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.8e-42 176.8 144 63.9
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 7.6e-40 168.7 92 80.4
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.5e-27 127.9 126 56.3
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.4e-25 121.3 107 56.1
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.6e-19 99.4 72 66.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.1e-17 95.1 69 68.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.4e-14 84.7 231 32.9
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 8.7e-12 75.5 128 35.9
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 3.8e-07 60.1 150 30.7


User provided reference genes

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