Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A313G20 Lonicera japonica HOM05D005623 ORTHO05D007130 2.0e-132 475.7 233 100.0
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 8.3e-94 347.4 202 79.7
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 9.2e-93 344.0 217 76.5
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 2.0e-92 342.8 195 81.5
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 6.0e-92 341.3 206 77.7
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 1.3e-91 340.1 205 78.5
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 1.7e-91 339.7 205 78.5
Oeu000326.2 Olea europaea HOM05D005623 ORTHO05D007130 1.7e-91 339.7 204 77.5
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 6.6e-91 337.8 195 82.6
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 1.5e-90 336.7 204 76.5
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 1.6e-89 333.2 218 72.5
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 1.6e-89 333.2 204 76.5
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 2.8e-89 332.4 203 76.4
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 3.6e-89 332.0 201 76.1
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 6.2e-89 331.3 193 79.3
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 8.1e-89 330.9 215 72.1
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 2.3e-88 329.3 195 77.9
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 3.1e-88 328.9 194 78.4
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 4.0e-88 328.6 208 76.0
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 8.9e-88 327.4 203 74.4
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 8.9e-88 327.4 199 75.9
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 4.4e-87 325.1 203 73.9
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 4.4e-87 325.1 195 77.4
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 5.8e-87 324.7 209 73.7
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 5.8e-87 324.7 209 73.7
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 1.3e-86 323.6 196 76.0
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 1.7e-86 323.2 199 75.9
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 1.7e-86 323.2 209 72.7
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.9e-86 322.4 203 74.4
Psat7g019640 Pisum sativum HOM05D005623 ORTHO05D007130 3.7e-86 322.0 203 73.4
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 3.7e-86 322.0 197 77.7
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 4.9e-86 321.6 195 75.9
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 4.9e-86 321.6 207 73.4
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 8.3e-86 320.9 209 72.7
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 1.1e-85 320.5 197 75.6
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 1.4e-85 320.1 193 77.2
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.4e-85 320.1 197 74.6
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 1.9e-85 319.7 198 75.3
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 1.9e-85 319.7 193 75.6
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 1.9e-85 319.7 214 70.1
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 2.4e-85 319.3 195 76.9
BcaC09g51738 Brassica carinata HOM05D000639 ORTHO05D003485 2.4e-85 319.3 192 77.6
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 2.4e-85 319.3 193 76.2
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 2.4e-85 319.3 204 75.0
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 3.2e-85 318.9 204 74.0
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 3.2e-85 318.9 204 73.5
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 3.2e-85 318.9 209 71.8
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 3.2e-85 318.9 191 77.5
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.1e-85 318.5 209 71.8
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 4.1e-85 318.5 202 74.3
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 5.4e-85 318.2 195 76.4
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 5.4e-85 318.2 203 73.9
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 5.4e-85 318.2 209 71.3
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 5.4e-85 318.2 209 71.3
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 5.4e-85 318.2 209 72.2
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 1.2e-84 317.0 195 76.4
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 1.2e-84 317.0 209 71.8
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 1.6e-84 316.6 215 69.8
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 2.1e-84 316.2 203 73.4
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 2.1e-84 316.2 181 81.8
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 2.1e-84 316.2 209 72.2
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 2.1e-84 316.2 198 73.2
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 2.7e-84 315.8 205 72.7
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 2.7e-84 315.8 195 75.4
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 3.5e-84 315.5 195 75.9
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 4.6e-84 315.1 203 72.4
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 6.0e-84 314.7 195 73.3
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 6.0e-84 314.7 216 69.4
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 7.8e-84 314.3 209 70.3
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 1.0e-83 313.9 192 76.0
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 3.9e-83 312.0 195 75.4
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 5.1e-83 311.6 198 73.7
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 5.1e-83 311.6 198 73.7
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 6.6e-83 311.2 209 69.9
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 1.5e-82 310.1 203 71.9
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 1.5e-82 310.1 203 72.4
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 1.5e-82 310.1 203 72.4
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 1.9e-82 309.7 203 72.4
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 1.9e-82 309.7 203 72.4
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 1.9e-82 309.7 203 72.4
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 2.5e-82 309.3 195 75.4
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 2.5e-82 309.3 194 72.7
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 1.2e-81 307.0 192 73.4
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 1.2e-81 307.0 221 67.4
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 4.0e-80 302.0 178 80.3
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 5.2e-80 301.6 192 71.4
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 9.9e-79 297.4 216 65.3
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 3.8e-78 295.4 219 66.7
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 1.1e-77 293.9 208 66.3
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 1.4e-77 293.5 197 68.5
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 3.9e-75 285.4 192 69.3
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 6.6e-75 284.6 199 70.4
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 1.4e-72 276.9 192 68.8
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 1.5e-71 273.5 201 65.7
Nn1g05570 Nelumbo nucifera HOM05D005623 ORTHO05D007130 2.2e-70 269.6 198 61.6
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 1.1e-69 267.3 197 64.0
PSO210G4788 Papaver somniferum HOM05D005623 ORTHO05D007130 1.4e-69 266.9 208 63.5
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 1.3e-65 253.8 193 62.2
Nitab4.5_0000713g0180 Nicotiana tabacum HOM05D005623 ORTHO05D007130 4.0e-64 248.8 159 73.0
CBR_g19775 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-61 240.4 182 63.2
PRCOL_00000211 Prasinoderma coloniale HOM05D005623 ORTHO05D007130 3.9e-51 205.7 194 50.5
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 1.6e-49 200.3 194 51.0
Glyma.08G029900 Glycine max HOM05D005623 ORTHO05D007130 2.6e-47 193.0 133 69.2
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 2.7e-44 183.0 126 69.0
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 4.3e-42 175.6 115 70.4
Hund25842 Selenicereus undatus HOM05D005623 ORTHO05D007130 7.4e-42 174.9 106 73.6
CDE06G1237 Ceratophyllum demersum HOM05D005623 ORTHO05D007130 1.8e-32 143.7 87 70.1
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 1.2e-31 141.0 189 38.6
MCO08G350 Micromonas commoda HOM05D005623 ORTHO05D007130 5.5e-29 132.1 186 37.6
CDE06G0203 Ceratophyllum demersum HOM05D005623 ORTHO05D007130 2.7e-28 129.8 81 74.1
PSO782G3778 Papaver somniferum HOM05D005623 ORTHO05D007130 2.7e-20 103.2 69 66.7
Hma1.2p1_0663F.1_g198810 Hydrangea macrophylla HOM05D005623 ORTHO05D007130 1.0e-19 101.3 62 72.6
PSO210G0842 Papaver somniferum HOM05D005623 ORTHO05D007130 2.4e-16 90.1 58 69.0
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 5.9e-15 85.5 60 66.7
Ca_28747_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007757 1.3e-14 84.3 167 34.1
Cre02.g083065 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 2.5e-13 80.1 174 35.1
Lj6C524T10 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-11 73.9 39 97.4
MD02G1074100 Malus domestica HOM05D005623 ORTHO05D007130 1.8e-11 73.9 45 80.0
Cre01.g046150 Chlamydomonas reinhardtii HOM05D002683 ORTHO05D007757 2.3e-11 73.6 188 31.4
Oeu053732.1 Olea europaea HOM05D002683 ORTHO05D007757 4.4e-10 69.3 185 27.6
SMO119G0363 Selaginella moellendorffii HOM05D002683 ORTHO05D007757 2.7e-07 60.1 166 29.5
CBR_g23088 Chara braunii HOM05D002683 ORTHO05D007757 1.3e-06 57.8 126 30.2
MD02G1074200 Malus domestica HOM05D005623 ORTHO05D007130 2.9e-06 56.6 42 54.8


User provided reference genes

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