Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A311T25 Lonicera japonica HOM05D000151 ORTHO05D000074 2.2e-102 375.6 183 100.0
Lj2P438T42 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-34 149.8 272 37.9
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 3.1e-27 125.9 121 48.8
Lj2C483T3 Lonicera japonica HOM05D000151 ORTHO05D000074 5.3e-27 125.2 118 50.0
Lj2C455G14 Lonicera japonica HOM05D000151 ORTHO05D000074 1.5e-26 123.6 102 60.8
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 4.5e-26 122.1 117 49.6
Lj2C471T6 Lonicera japonica HOM05D000151 ORTHO05D000074 8.4e-25 117.9 128 43.0
Lj2P471T10 Lonicera japonica HOM05D000151 ORTHO05D000074 7.1e-24 114.8 121 44.6
Lj2C464T4 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-23 112.8 121 44.6
Lj2C479T1 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-23 112.8 121 43.0
Lj2C471G1 Lonicera japonica HOM05D000151 ORTHO05D000074 5.1e-22 108.6 121 43.0
Lj3A74T15 Lonicera japonica HOM05D000151 ORTHO05D000074 5.1e-22 108.6 110 48.2
Lj2C500G2 Lonicera japonica HOM05D000151 ORTHO05D000074 2.1e-20 103.2 121 45.5
Lj2P476T19 Lonicera japonica HOM05D000151 ORTHO05D000074 2.4e-19 99.8 113 42.5
Lj2P470T21 Lonicera japonica HOM05D000151 ORTHO05D000074 1.3e-17 94.0 119 44.5
Lj2P472T30 Lonicera japonica HOM05D000151 ORTHO05D000074 6.5e-17 91.7 107 41.1
Lj2P495T35 Lonicera japonica HOM05D000151 ORTHO05D000074 5.5e-16 88.6 245 30.6
Rhsim03G0212000 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.7e-15 86.3 123 42.3
Lj2C486T14 Lonicera japonica HOM05D000151 ORTHO05D000074 5.1e-14 82.0 209 34.0
Lj2P549T12 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-13 80.9 80 48.8
Potri.002G015700 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.5e-13 80.5 118 39.8
Eucgr.B03923 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.3e-13 79.0 116 40.5
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 7.4e-13 78.2 121 35.5
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 1.6e-12 77.0 122 36.1
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 2.2e-12 76.6 119 36.1
Lj2P933T11 Lonicera japonica HOM05D000151 ORTHO05D000074 2.8e-12 76.3 80 51.2
Peaxi162Scf00074g00085 Petunia axillaris HOM05D000151 ORTHO05D000074 2.8e-12 76.3 117 36.8
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.7e-12 75.9 164 32.3
Peaxi162Scf00074g00086 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-12 75.5 117 36.8
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.3e-12 75.1 118 37.3
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.3e-12 75.1 120 35.8
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 6.3e-12 75.1 118 34.7
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 6.3e-12 75.1 121 35.5
TWI56G0553 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.3e-12 75.1 124 34.7
Lj2A495T44 Lonicera japonica HOM05D000151 ORTHO05D000074 8.2e-12 74.7 117 35.9
Peaxi162Scf00074g00087 Petunia axillaris HOM05D000151 ORTHO05D000074 1.1e-11 74.3 117 36.8
Aqoxy5G01069 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-11 73.9 124 35.5
Lsat_1_v5_gn_9_46700 Lactuca sativa HOM05D000151 ORTHO05D000074 1.4e-11 73.9 123 35.0
QL01p002550 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-11 73.9 121 36.4
Aqoxy5G01063 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-11 73.6 124 35.5
MELO3C017000.2 Cucumis melo HOM05D000151 ORTHO05D000074 2.4e-11 73.2 119 34.5
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 2.4e-11 73.2 120 34.2
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 2.4e-11 73.2 117 34.2
Lj2A451T46 Lonicera japonica HOM05D000151 ORTHO05D000074 2.4e-11 73.2 97 37.1
Lalb_Chr23g0265911 Lupinus albus HOM05D000151 ORTHO05D000074 2.4e-11 73.2 150 35.3
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.4e-11 73.2 121 33.1
CiPaw.06G077200 Carya illinoinensis HOM05D000151 ORTHO05D000074 3.1e-11 72.8 117 39.3
Lj2A493T43 Lonicera japonica HOM05D000151 ORTHO05D000074 3.1e-11 72.8 117 35.0
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 3.1e-11 72.8 120 33.3
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 4.1e-11 72.4 122 33.6
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 4.1e-11 72.4 121 32.2
ClCG05G015310 Citrullus lanatus HOM05D000151 ORTHO05D000074 5.3e-11 72.0 120 34.2
Lj2P442T32 Lonicera japonica HOM05D000151 ORTHO05D000074 5.3e-11 72.0 73 45.2
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 5.3e-11 72.0 122 36.1
Lj2P494T20 Lonicera japonica HOM05D000151 ORTHO05D000074 6.9e-11 71.6 78 43.6
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 6.9e-11 71.6 120 32.5
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.9e-11 71.6 120 35.0
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 9.0e-11 71.2 70 51.4
COL.COLO4_26063 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.2e-10 70.9 123 34.1
Gorai.010G001100 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.2e-10 70.9 125 34.4
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 1.2e-10 70.9 73 46.6
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-10 70.5 116 34.5
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-10 70.5 116 34.5
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 2.0e-10 70.1 120 36.7
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 2.0e-10 70.1 136 30.9
COL.COLO4_12589 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.6e-10 69.7 114 33.3
Gohir.A10G237000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 5.9e-10 68.6 75 44.0
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 5.9e-10 68.6 115 34.8
CiPaw.06G046500 Carya illinoinensis HOM05D000151 ORTHO05D000074 7.7e-10 68.2 117 37.6
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.0e-09 67.8 120 34.2
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 1.0e-09 67.8 119 32.8
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-09 67.8 121 33.1
QL09p049374 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-09 67.8 120 35.0
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.7e-09 67.0 118 36.4
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-09 67.0 120 34.2
Peaxi162Scf00038g02647 Petunia axillaris HOM05D000115 ORTHO05D003511 2.2e-09 66.6 164 27.4
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 5.0e-09 65.5 118 36.4
Sopen02g036610 Solanum pennellii HOM05D000644 ORTHO05D000504 5.0e-09 65.5 114 36.0
Lj2A477T14 Lonicera japonica HOM05D000151 ORTHO05D000074 8.5e-09 64.7 70 44.3
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 8.5e-09 64.7 107 33.6
MBI15_g35732_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.4e-08 63.9 121 33.1
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 1.9e-08 63.5 119 35.3
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.9e-08 63.5 139 31.7
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 1.9e-08 63.5 114 36.0
Lj2C470T4 Lonicera japonica HOM05D000151 ORTHO05D000074 2.5e-08 63.2 70 42.9
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 3.2e-08 62.8 111 34.2
Thecc.01G383500 Theobroma cacao HOM05D000151 ORTHO05D000074 3.2e-08 62.8 114 28.1
Thecc.01G383700 Theobroma cacao HOM05D000151 ORTHO05D000074 3.2e-08 62.8 114 28.1
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 4.2e-08 62.4 134 31.3
Gohir.A10G235800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 5.5e-08 62.0 95 33.7
Gorai.011G286500 Gossypium raimondii HOM05D000151 ORTHO05D000074 5.5e-08 62.0 92 34.8
Gorai.011G286600 Gossypium raimondii HOM05D000151 ORTHO05D000074 5.5e-08 62.0 115 32.2
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.4e-08 61.2 121 31.4
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 9.4e-08 61.2 118 33.9
Dinv20253 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-07 60.8 103 37.9
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.2e-07 60.8 142 32.4
Medtr3g114970 Medicago truncatula HOM05D000151 ORTHO05D000074 4.6e-07 58.9 115 30.4
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 4.6e-07 58.9 118 31.4
MBI12_g28746_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.1e-07 58.5 117 32.5
MBI17_g17509_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.1e-07 58.5 101 35.6
Dinv20250 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-06 57.8 103 35.9
Dinv40802 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-06 57.0 121 30.6
Dinv40803 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-06 57.0 121 30.6
AUR62005128 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.0e-06 56.2 139 28.8
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 3.0e-06 56.2 123 26.8
arahy.Tifrunner.gnm1.ann1.2H6W8Q Arachis hypogaea HOM05D000151 ORTHO05D000074 3.9e-06 55.8 124 31.5
arahy.Tifrunner.gnm1.ann1.65DGHI Arachis hypogaea HOM05D000151 ORTHO05D000074 3.9e-06 55.8 124 31.5
arahy.Tifrunner.gnm1.ann1.F1QGJW Arachis hypogaea HOM05D000151 ORTHO05D000074 3.9e-06 55.8 124 31.5
arahy.Tifrunner.gnm1.ann1.F20K0V Arachis hypogaea HOM05D000151 ORTHO05D000074 3.9e-06 55.8 124 31.5
MBI18_g17004_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.9e-06 55.8 137 25.5
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 3.9e-06 55.8 119 32.8
Atru.chr13.192 Acer truncatum HOM05D000151 ORTHO05D000074 5.1e-06 55.5 107 29.9
Lj1P1142T22 Lonicera japonica HOM05D000151 ORTHO05D000074 5.1e-06 55.5 80 40.0
Peaxi162Scf00078g00539 Petunia axillaris HOM05D000151 ORTHO05D000074 6.7e-06 55.1 175 27.4
Peaxi162Scf00078g00540 Petunia axillaris HOM05D000151 ORTHO05D000074 6.7e-06 55.1 175 27.4
arahy.Tifrunner.gnm1.ann1.NJ4X6S Arachis hypogaea HOM05D000151 ORTHO05D000074 8.8e-06 54.7 133 25.6
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 8.8e-06 54.7 132 29.5


User provided reference genes

Program Settings