Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 5.1e-196 687.6 353 100.0
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.0e-163 579.3 360 84.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 4.4e-163 578.2 351 84.6
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.3e-162 576.6 336 86.0
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 6.3e-162 574.3 335 86.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.1e-161 573.5 344 84.3
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 7.0e-161 570.9 349 83.4
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.1e-158 563.5 353 83.6
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.5e-158 562.4 317 88.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.3e-158 561.6 353 83.0
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.2e-157 560.1 353 79.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 3.6e-157 558.5 360 79.7
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 8.0e-157 557.4 364 79.7
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.8e-156 556.2 335 83.0
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.3e-156 555.8 350 80.6
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.2e-155 553.5 333 83.8
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.2e-155 553.5 312 87.2
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 3.4e-155 552.0 316 86.1
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 5.7e-155 551.2 359 80.2
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 7.5e-155 550.8 324 85.5
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 7.5e-155 550.8 316 86.1
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 2.2e-154 549.3 335 83.0
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 2.9e-154 548.9 342 80.4
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.7e-154 548.5 338 82.5
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.9e-154 548.1 340 79.7
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.4e-154 547.7 318 86.5
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.4e-154 547.7 334 82.6
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.4e-153 546.6 349 79.9
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-153 546.2 361 78.7
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 5.4e-153 544.7 331 83.1
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 5.4e-153 544.7 325 83.7
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 5.4e-153 544.7 331 82.8
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 7.0e-153 544.3 361 78.7
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 9.2e-153 543.9 350 79.7
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 9.2e-153 543.9 359 78.6
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 9.2e-153 543.9 359 78.6
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.6e-152 543.1 364 76.9
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.6e-152 543.1 361 78.1
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.6e-152 543.1 337 83.1
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.6e-152 543.1 343 79.6
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.6e-152 543.1 343 82.2
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.0e-152 542.7 343 79.3
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.0e-152 542.7 350 78.9
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.7e-152 542.3 359 77.2
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 2.7e-152 542.3 361 77.8
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.5e-152 542.0 355 79.7
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 5.9e-152 541.2 337 80.4
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 7.8e-152 540.8 332 81.6
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 7.8e-152 540.8 345 80.9
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.8e-152 540.8 345 80.9
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 7.8e-152 540.8 331 81.6
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.3e-151 540.0 359 77.7
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.3e-151 539.3 333 81.7
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.0e-151 538.9 337 82.5
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 3.0e-151 538.9 360 76.7
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.9e-151 538.5 345 80.6
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.0e-151 538.1 337 82.5
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 5.0e-151 538.1 355 78.3
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 6.6e-151 537.7 360 76.9
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 8.6e-151 537.3 356 77.5
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 8.6e-151 537.3 330 80.6
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.9e-150 536.2 330 81.2
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.9e-150 536.2 344 80.8
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.9e-150 536.2 327 82.0
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 3.3e-150 535.4 339 79.9
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 3.3e-150 535.4 360 77.5
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 4.3e-150 535.0 329 80.9
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 5.6e-150 534.6 327 81.7
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 7.3e-150 534.3 332 80.4
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.2e-149 533.5 325 80.6
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.6e-149 533.1 333 80.5
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.6e-149 533.1 342 78.1
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 2.8e-149 532.3 368 75.0
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 2.8e-149 532.3 325 80.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.6e-149 531.9 332 81.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 3.6e-149 531.9 342 80.4
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 4.7e-149 531.6 335 79.1
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 4.7e-149 531.6 325 80.6
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 4.7e-149 531.6 380 73.4
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.0e-149 530.8 344 78.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 8.0e-149 530.8 332 81.0
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.0e-148 530.4 316 82.6
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 1.4e-148 530.0 325 80.9
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.4e-148 530.0 344 78.5
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.4e-148 530.0 341 79.8
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 3.1e-148 528.9 345 80.3
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 4.0e-148 528.5 310 85.2
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 4.0e-148 528.5 310 82.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 5.2e-148 528.1 345 78.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.2e-148 528.1 353 77.6
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 5.2e-148 528.1 337 78.3
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.5e-147 526.6 344 78.2
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 9.8e-147 523.9 351 76.9
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 9.8e-147 523.9 321 80.4
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.3e-146 523.5 360 74.7
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.7e-146 521.9 326 78.8
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 3.7e-146 521.9 325 79.7
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 4.9e-146 521.5 315 83.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 6.4e-146 521.2 322 81.7
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 4.1e-145 518.5 356 75.8
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.5e-144 515.4 312 83.0
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 3.5e-144 515.4 312 83.0
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.5e-144 515.4 312 83.0
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 4.6e-144 515.0 319 81.5
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 6.0e-144 514.6 318 80.5
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 7.8e-144 514.2 332 78.3
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 7.8e-144 514.2 332 78.3
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.3e-143 513.5 316 82.6
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.3e-143 513.5 316 81.3
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.3e-143 512.7 361 72.9
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.0e-143 512.3 312 82.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 3.9e-143 511.9 317 79.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 8.6e-143 510.8 312 82.4
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 3.3e-142 508.8 335 78.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.3e-142 508.4 298 83.2
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.1e-140 503.8 341 76.0
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 2.3e-140 502.7 321 76.9
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 5.2e-140 501.5 307 80.1
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 8.9e-140 500.7 356 73.9
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.2e-139 500.4 326 77.6
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.2e-139 500.4 335 76.7
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 2.7e-136 489.2 333 74.8
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.5e-136 488.8 340 73.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.1e-134 483.8 301 78.7
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 5.6e-134 481.5 450 59.8
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 1.4e-129 466.8 270 83.7
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.5e-128 462.2 359 68.8
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.1e-127 458.4 362 70.2
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 5.1e-127 458.4 309 70.9
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 8.6e-127 457.6 312 68.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.2e-125 453.8 324 71.9
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 6.2e-125 451.4 366 68.9
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 8.1e-125 451.1 353 68.8
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.4e-124 450.3 277 80.1
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.4e-124 449.5 277 82.7
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-123 447.2 312 74.7
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.1e-120 436.4 314 67.2
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.1e-120 436.4 267 81.6
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.3e-119 433.7 310 66.8
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.0e-119 432.6 312 65.1
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.3e-118 427.9 259 82.2
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.4e-116 422.9 311 66.6
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 5.8e-115 418.3 322 66.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.8e-111 406.8 352 62.2
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.3e-110 402.5 327 59.9
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 3.6e-109 399.1 385 57.4
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 3.4e-107 392.5 334 63.5
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.8e-106 389.0 222 86.5
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.3e-103 380.6 245 80.0
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 7.4e-94 348.2 335 54.3
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 7.9e-88 328.2 222 70.3
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 4.5e-83 312.4 245 71.4
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 5.0e-66 255.8 151 84.8
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.2e-65 252.7 329 48.9
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 9.4e-57 224.9 199 58.8
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 7.7e-51 205.3 159 68.6
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.0e-43 180.6 180 54.4
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 4.3e-33 146.4 89 80.9
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 8.3e-29 132.1 282 33.0
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.4e-28 130.6 108 64.8
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 5.6e-25 119.4 332 29.5
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.9e-21 106.3 247 36.0
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.7e-19 100.5 79 70.9
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.7e-19 100.5 65 70.8
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 3.5e-19 100.1 320 25.9
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 3.0e-18 97.1 61 80.3
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 3.0e-18 97.1 61 80.3
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.1e-17 95.1 61 80.3
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 3.6e-16 90.1 59 72.9
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.2e-16 89.4 380 25.3
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.5e-09 68.2 108 35.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.5e-09 68.2 33 93.9
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 7.3e-09 65.9 57 64.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 8.1e-08 62.4 41 70.7
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.1e-07 62.0 59 61.0
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.4e-07 61.6 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.4e-07 60.8 39 71.8
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 5.8e-06 56.2 35 71.4
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 9.9e-06 55.5 50 60.0


User provided reference genes

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