Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A276T51 Lonicera japonica HOM05D008705 ORTHO05D000669 1.3e-96 356.3 174 100.0
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 1.9e-87 325.9 200 81.5
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.0e-24 115.5 148 41.9
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 8.9e-24 114.4 157 40.8
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 8.9e-24 114.4 148 39.9
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 2.8e-22 109.4 146 42.5
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 2.8e-22 109.4 159 38.4
FvH4_4g05492 Fragaria vesca HOM05D008705 ORTHO05D000669 2.5e-18 96.3 175 31.4
FvH4_2g08145 Fragaria vesca HOM05D008705 ORTHO05D000669 3.3e-18 95.9 175 31.4
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 7.3e-18 94.7 120 42.5
FAN20G2701 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.8e-17 92.8 175 30.9
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 2.3e-16 89.7 71 54.9
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 6.8e-16 88.2 71 53.5
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.5e-15 87.0 141 36.2
RcHm_v2.0_Chr1g0345631 Rosa chinensis HOM05D008705 ORTHO05D000669 2.9e-14 82.8 71 50.7
RcHm_v2.0_Chr0c17g0499961 Rosa chinensis HOM05D008705 ORTHO05D000669 4.1e-13 79.0 70 51.4
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 5.4e-13 78.6 98 38.8
FAN15G0639 Fragaria x ananassa HOM05D008705 ORTHO05D000669 5.4e-13 78.6 98 38.8
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 1.6e-12 77.0 194 27.8
RcHm_v2.0_Chr6g0272461 Rosa chinensis HOM05D008705 ORTHO05D000669 2.7e-12 76.3 65 52.3
RcHm_v2.0_Chr4g0415291 Rosa chinensis HOM05D008705 ORTHO05D000669 4.6e-12 75.5 65 50.8
RcHm_v2.0_Chr4g0410891 Rosa chinensis HOM05D008705 ORTHO05D000669 8.6e-11 71.2 60 53.3
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 1.1e-10 70.9 214 23.8
PSO675G3989 Papaver somniferum HOM05D000791 ORTHO05D000669 1.9e-10 70.1 70 47.1
PSO675G8190 Papaver somniferum HOM05D017761 ORTHO05D000669 9.5e-10 67.8 70 45.7
Aqoxy4G01021 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 1.6e-09 67.0 137 30.7
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 3.6e-09 65.9 172 30.2
Lsat_1_v5_gn_7_48900 Lactuca sativa HOM05D014621 ORTHO05D015019 1.4e-08 63.9 152 23.7
CANSAT01G1847 Cannabis sativa HOM05D014621 ORTHO05D015019 1.8e-08 63.5 216 23.1
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-08 63.2 170 27.6
HanXRQChr05g0142331 Helianthus annuus HOM05D014621 ORTHO05D015019 5.2e-08 62.0 212 22.6
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 6.8e-08 61.6 170 28.8
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.0e-07 60.1 164 28.0
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 2.0e-07 60.1 128 25.8
Atru.chr9.7 Acer truncatum HOM05D008705 ORTHO05D000669 2.6e-07 59.7 87 35.6
Lsat_1_v5_gn_2_105040 Lactuca sativa HOM05D014621 ORTHO05D015019 5.8e-07 58.5 152 22.4
MD11G1169500 Malus domestica HOM05D008985 ORTHO05D000222 7.5e-07 58.2 127 30.7
PSO384G0881 Papaver somniferum HOM05D017761 ORTHO05D000669 7.5e-07 58.2 161 26.1
Aqoxy3G01388 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 9.8e-07 57.8 70 41.4
FAN12G3968 Fragaria x ananassa HOM05D008705 ORTHO05D000669 9.8e-07 57.8 79 40.5
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.8e-07 57.8 167 26.9
MBI11_g41621_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-06 57.0 137 29.9
MBI10_g06414_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-06 56.2 126 26.2
MELO3C028826.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.7e-06 55.8 92 32.6
Dinv18123 Davidia involucrata HOM05D010418 ORTHO05D000669 6.4e-06 55.1 114 30.7
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.4e-06 55.1 167 26.3
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.3e-06 54.7 82 34.1
MBI17_g21608_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.3e-06 54.7 79 35.4
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 8.3e-06 54.7 122 30.3


User provided reference genes

Program Settings