Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 5.0e-140 501.1 257 100.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 5.8e-48 195.3 271 46.1
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 9.9e-48 194.5 281 45.6
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.8e-33 147.1 261 40.2
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 9.0e-33 144.8 261 38.7
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 7.6e-32 141.7 270 39.3
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.9e-30 137.1 267 39.0
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.9e-27 127.1 276 40.2
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.9e-27 127.1 256 38.3
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 7.4e-27 125.2 265 36.2
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.3e-25 119.0 295 34.9
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.6e-24 116.7 260 37.3
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 7.7e-24 115.2 272 34.6
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.9e-23 113.2 258 34.9
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.5e-22 109.0 204 38.7
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 9.4e-22 108.2 276 34.1
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.2e-21 107.8 271 34.3
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.6e-21 105.9 273 33.7
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 4.6e-21 105.9 278 34.9
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 7.9e-21 105.1 204 40.2
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 1.4e-20 104.4 262 34.4
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.9e-20 102.8 256 33.2
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 5.1e-20 102.4 272 33.1
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.1e-19 101.3 269 31.6
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 7.4e-19 98.6 281 34.2
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 9.7e-19 98.2 271 31.7
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 9.7e-19 98.2 261 34.5
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 4.8e-18 95.9 165 42.4
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.8e-18 95.9 208 36.5
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 6.3e-18 95.5 262 35.9
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.9e-15 86.7 260 32.7
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 6.5e-15 85.5 242 32.6
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 6.5e-15 85.5 101 49.5
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 8.5e-15 85.1 264 32.6
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.9e-14 84.0 274 31.0
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.5e-14 83.6 258 30.2
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 3.2e-14 83.2 169 38.5
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.2e-14 83.2 258 29.8
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 3.2e-14 83.2 247 33.6
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 4.2e-14 82.8 243 32.1
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 4.2e-14 82.8 202 33.7
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 9.4e-14 81.6 258 30.6
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.2e-13 81.3 247 33.2
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.1e-13 80.5 247 33.2
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.7e-13 80.1 265 32.8
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 3.6e-13 79.7 268 28.4
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 4.7e-13 79.3 269 32.3
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.9e-13 78.6 258 30.2
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.4e-12 77.8 251 31.9
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 2.3e-12 77.0 247 30.8
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 2.3e-12 77.0 261 32.6
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 5.2e-12 75.9 250 30.4
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 2.0e-11 73.9 243 30.0
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 2.6e-11 73.6 250 30.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 3.3e-11 73.2 165 34.5
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 5.7e-11 72.4 167 36.5
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.7e-11 72.4 165 37.0
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.3e-10 71.2 239 31.4
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.2e-10 70.5 243 30.9
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.8e-10 70.1 241 29.5
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 8.2e-10 68.6 156 37.2
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.4e-09 67.8 304 27.0
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 5.3e-09 65.9 172 33.1
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 7.0e-09 65.5 235 29.8
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 7.0e-09 65.5 264 29.5
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 9.1e-09 65.1 157 33.8
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 9.1e-09 65.1 176 34.1
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.0e-08 63.9 140 38.6
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 2.0e-08 63.9 275 29.5
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 3.5e-08 63.2 167 31.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 7.7e-08 62.0 258 27.9
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.3e-07 61.2 162 32.7
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.7e-07 60.8 93 43.0
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 1.7e-07 60.8 244 27.5
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.7e-07 60.8 273 26.4
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 3.8e-07 59.7 246 28.5
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 5.0e-07 59.3 141 36.9
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 8.5e-07 58.5 181 32.0
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 8.5e-07 58.5 151 31.1
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.5e-06 57.8 104 43.3
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.5e-06 57.0 163 30.1
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 3.2e-06 56.6 241 28.2


User provided reference genes

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