Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 0.0e+00 1225.7 728 100.0
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 1.1e-192 677.6 712 61.5
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.4e-192 676.4 739 63.7
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 2.7e-191 672.9 747 60.1
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 1.0e-190 671.0 726 61.6
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 5.1e-190 668.7 740 63.0
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.1e-187 661.0 687 59.4
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 3.1e-187 659.4 704 61.4
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 7.6e-186 654.8 745 62.7
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 3.8e-185 652.5 731 61.3
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 3.8e-185 652.5 754 61.3
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 8.4e-185 651.4 722 59.3
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 8.4e-185 651.4 722 59.3
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 1.4e-184 650.6 741 63.4
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 9.3e-184 647.9 744 56.7
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 2.1e-183 646.7 728 60.7
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 6.0e-183 645.2 728 59.3
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 3.9e-182 642.5 742 60.5
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 1.1e-181 641.0 713 58.2
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 1.9e-181 640.2 737 59.4
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.3e-180 637.5 725 58.1
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 4.8e-180 635.6 750 55.2
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 1.1e-179 634.4 694 63.8
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 9.0e-179 631.3 745 61.5
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 1.5e-178 630.6 710 61.1
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 2.6e-178 629.8 746 57.2
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 4.5e-178 629.0 729 57.6
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 5.8e-178 628.6 731 62.0
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.3e-177 627.5 737 59.2
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 7.1e-176 621.7 742 60.1
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 7.9e-175 618.2 706 59.5
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 6.7e-174 615.1 674 64.1
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 5.7e-173 612.1 716 58.4
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 6.3e-172 608.6 741 56.0
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 9.0e-171 604.7 750 56.1
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 2.6e-170 603.2 725 54.3
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 2.9e-169 599.7 742 54.2
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 5.0e-169 599.0 726 57.6
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 5.0e-169 599.0 734 59.7
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.2e-167 594.3 749 56.3
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 2.1e-167 593.6 736 57.7
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 1.9e-160 570.5 730 57.0
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 5.5e-160 568.9 706 55.9
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 3.0e-158 563.1 758 57.0
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 1.1e-157 561.2 701 58.9
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 3.3e-157 559.7 741 56.5
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 5.7e-157 558.9 675 56.6
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 4.1e-155 552.7 742 54.7
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 1.3e-153 547.7 546 59.3
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 1.3e-153 547.7 735 56.3
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 4.2e-152 542.7 706 54.8
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 1.6e-151 540.8 792 51.1
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 1.4e-150 537.7 753 54.7
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 8.8e-150 535.0 719 54.7
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 1.3e-148 531.2 742 51.9
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 8.2e-148 528.5 694 56.5
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 1.1e-147 528.1 763 53.7
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 2.0e-146 523.9 742 52.4
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 7.7e-146 521.9 682 56.2
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 2.2e-145 520.4 771 52.8
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 5.0e-145 519.2 724 54.1
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 2.5e-144 516.9 711 57.2
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 3.2e-144 516.5 743 53.8
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 9.4e-144 515.0 743 51.1
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 3.6e-143 513.1 763 48.4
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 2.3e-142 510.4 764 49.5
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 4.0e-142 509.6 715 56.6
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 7.5e-141 505.4 718 52.4
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 1.3e-140 504.6 705 53.5
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 8.2e-140 501.9 733 51.7
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 2.7e-138 496.9 719 54.1
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 1.9e-136 490.7 741 50.2
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 3.2e-136 490.0 749 51.1
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 9.8e-133 478.4 722 49.7
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 5.9e-130 469.2 747 49.0
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 2.3e-129 467.2 537 57.9
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 6.1e-127 459.1 699 51.1
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 9.8e-125 451.8 311 77.2
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 2.2e-124 450.7 539 55.7
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 7.0e-123 445.7 755 50.5
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 3.3e-120 436.8 719 48.8
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 3.3e-120 436.8 750 48.5
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 5.6e-120 436.0 661 53.4
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 3.7e-116 423.3 429 65.3
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 4.9e-116 422.9 544 53.9
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 6.0e-114 416.0 738 51.4
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 7.3e-112 409.1 534 54.1
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 2.6e-109 400.6 731 46.1
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 1.3e-108 398.3 732 46.9
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 1.7e-108 397.9 712 47.5
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 3.2e-107 393.7 732 46.2
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 6.0e-106 389.4 718 48.9
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 1.3e-105 388.3 672 42.6
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 8.6e-105 385.6 699 48.1
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 1.4e-102 378.3 698 47.9
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 8.3e-100 369.0 742 47.0
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 5.4e-99 366.3 705 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 4.6e-98 363.2 746 43.8
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 1.0e-97 362.1 378 64.0
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 3.6e-95 353.6 717 42.0
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 4.7e-95 353.2 418 56.0
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 9.9e-93 345.5 638 44.8
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 2.4e-91 340.9 716 44.1
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 2.1e-87 327.8 618 43.2
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 9.0e-86 322.4 720 40.7
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.0e-85 321.2 745 39.5
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 3.4e-85 320.5 502 47.0
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 4.2e-75 287.0 857 33.4
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 1.6e-71 275.0 881 34.2
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 1.2e-69 268.9 340 56.8
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 7.6e-69 266.2 196 70.4
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 4.5e-61 240.4 213 57.3
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 2.8e-55 221.1 295 54.9
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 3.1e-54 217.6 298 47.0
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 9.0e-54 216.1 542 35.6
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.0e-52 212.6 262 63.0
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 1.7e-52 211.8 731 31.2
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 4.6e-50 203.8 205 52.7
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 5.5e-43 180.3 260 53.5
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 2.4e-38 164.9 255 41.6
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 4.1e-38 164.1 225 44.0
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 1.2e-37 162.5 761 29.7
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 1.0e-36 159.5 454 32.4
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 3.8e-36 157.5 235 46.4
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 7.2e-35 153.3 119 71.4
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.4e-30 139.0 100 73.0
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 2.0e-29 135.2 279 45.9
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.3e-28 132.5 193 51.3
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 2.7e-26 124.8 130 59.2
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 4.8e-23 114.0 74 73.0
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 6.3e-23 113.6 122 50.0
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 3.1e-22 111.3 138 52.2
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 7.7e-21 106.7 100 51.0
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 3.8e-20 104.4 223 36.3
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 3.2e-19 101.3 186 39.2
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 1.2e-18 99.4 103 51.5
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 2.1e-18 98.6 88 59.1
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 4.7e-18 97.4 182 38.5
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 6.1e-18 97.1 324 32.4
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 4.0e-17 94.4 80 65.0
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 4.0e-17 94.4 92 52.2
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 1.2e-13 82.8 99 52.5
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 7.7e-13 80.1 82 51.2
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 3.3e-11 74.7 63 60.3
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 4.7e-10 70.9 60 56.7
Nn1g05556 Nelumbo nucifera HOM05D004723 ORTHO05D006176 2.0e-08 65.5 48 58.3
BolC3t16251H Brassica oleracea HOM05D004723 ORTHO05D019910 2.8e-07 61.6 88 50.0
C03p39890 Brassica napus HOM05D004723 ORTHO05D019910 3.7e-07 61.2 72 52.8
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 1.4e-06 59.3 56 51.8
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.8e-06 58.9 70 42.9
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.8e-06 58.9 70 42.9
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 5.4e-06 57.4 56 50.0
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 9.2e-06 56.6 70 41.4


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