Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.8e-105 386.0 194 100.0
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.6e-72 275.8 152 91.4
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.1e-70 268.9 150 89.3
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 4.1e-70 268.5 150 88.7
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 7.0e-70 267.7 149 89.9
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 3.5e-69 265.4 150 86.7
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.2e-68 262.7 161 82.0
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.1e-67 260.4 151 85.4
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.5e-67 260.0 150 85.3
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.9e-67 259.6 150 86.7
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.5e-67 259.2 150 86.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.2e-67 258.8 151 86.8
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 4.2e-67 258.5 149 86.6
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 4.2e-67 258.5 149 85.9
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 7.2e-67 257.7 150 86.7
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.2e-66 256.9 150 84.7
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.2e-66 256.9 151 84.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.6e-66 256.5 158 82.9
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.6e-66 256.5 158 82.9
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.6e-66 256.5 170 77.1
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.6e-66 256.5 150 84.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.6e-66 256.5 150 84.7
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.1e-66 256.1 149 85.2
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.1e-66 256.1 150 84.0
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.1e-66 256.1 150 84.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.7e-66 255.8 150 84.0
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 3.6e-66 255.4 149 83.9
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 4.7e-66 255.0 150 82.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 6.1e-66 254.6 150 84.0
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 8.0e-66 254.2 150 85.3
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 8.0e-66 254.2 152 83.6
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.0e-65 253.8 149 84.6
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.0e-65 253.8 150 82.7
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.3e-65 252.7 150 83.3
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.0e-65 252.3 142 88.0
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.0e-65 251.9 152 84.2
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.8e-65 251.1 164 78.7
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 8.8e-65 250.8 152 83.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 8.8e-65 250.8 151 82.8
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.2e-64 250.4 147 83.7
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.5e-64 250.0 149 81.9
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.0e-64 249.6 150 85.3
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 2.0e-64 249.6 150 85.3
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.6e-64 249.2 147 83.7
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 4.4e-64 248.4 150 80.0
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 4.4e-64 248.4 150 80.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 5.7e-64 248.1 150 80.0
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 7.5e-64 247.7 150 82.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.3e-63 246.9 150 78.7
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.7e-63 246.5 150 80.0
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.2e-63 246.1 149 84.6
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.8e-63 245.7 149 79.9
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 2.8e-63 245.7 149 81.2
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.8e-63 245.7 149 80.5
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.8e-63 245.7 150 79.3
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 4.8e-63 245.0 149 82.6
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 4.8e-63 245.0 149 81.2
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 6.3e-63 244.6 151 80.1
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.1e-62 243.8 151 78.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.4e-62 243.4 151 81.5
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.4e-62 243.4 149 80.5
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.8e-62 243.0 167 73.1
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.4e-62 242.7 149 79.2
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.4e-62 242.7 161 75.8
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.1e-62 241.9 158 79.7
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 4.1e-62 241.9 149 77.9
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.0e-62 241.1 136 86.8
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.2e-61 240.4 149 79.2
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.7e-61 239.2 148 80.4
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 2.7e-61 239.2 149 77.2
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.5e-61 238.4 150 78.0
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 7.7e-61 237.7 149 77.2
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.0e-60 235.0 150 79.3
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 8.5e-60 234.2 149 77.2
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.2e-59 231.9 130 88.5
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 2.7e-58 229.2 146 75.3
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 8.0e-58 227.6 150 75.3
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-57 226.9 141 82.3
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.8e-57 224.6 150 77.3
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.2e-56 223.8 150 72.7
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.5e-56 223.4 128 88.3
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.0e-56 223.0 128 84.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 5.7e-56 221.5 155 71.6
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 3.7e-55 218.8 173 63.6
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.1e-54 215.7 170 66.5
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 4.1e-54 215.3 150 70.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 4.1e-54 215.3 150 70.0
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 1.0e-52 210.7 161 67.1
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.3e-52 210.3 153 68.6
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.9e-52 209.1 153 68.6
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.8e-52 208.8 154 68.2
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 3.8e-52 208.8 168 64.9
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 5.0e-52 208.4 150 64.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 6.6e-52 208.0 150 67.3
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 8.6e-52 207.6 131 74.0
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 9.5e-51 204.1 166 64.5
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.4e-49 200.3 151 62.9
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 8.9e-49 197.6 150 71.3
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 2.6e-48 196.1 109 89.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 3.4e-48 195.7 108 89.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.1e-46 188.7 163 58.3
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 7.3e-43 177.9 110 81.8
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.2e-40 170.6 104 83.7
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 4.0e-33 145.6 96 76.0
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 5.2e-33 145.2 94 73.4
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 8.9e-33 144.4 94 76.6
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.2e-32 144.1 88 80.7
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.9e-31 139.4 85 80.0
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.1e-30 137.5 96 72.9
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.2e-30 136.0 72 88.9
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.6e-26 123.6 146 43.2
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 7.1e-22 108.2 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 7.1e-22 108.2 68 75.0
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.1e-17 92.8 58 77.6
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.9e-15 85.5 52 80.8
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 8.1e-10 68.2 40 80.0


User provided reference genes

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