Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 3.1e-92 342.0 206 100.0
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 7.4e-54 214.5 192 68.2
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 3.5e-51 205.7 196 65.3
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 4.5e-51 205.3 196 64.3
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 8.0e-48 194.5 198 62.6
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 3.0e-47 192.6 198 62.1
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 3.3e-46 189.1 194 61.3
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 4.4e-46 188.7 198 62.1
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 9.7e-46 187.6 198 61.1
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 2.8e-45 186.0 196 60.2
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 3.7e-45 185.7 194 59.8
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 1.1e-44 184.1 199 60.3
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 1.1e-44 184.1 197 59.4
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 3.1e-44 182.6 202 58.9
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 7.0e-44 181.4 190 58.9
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 7.0e-44 181.4 190 58.9
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.2e-43 180.6 197 58.9
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 2.0e-43 179.9 195 61.0
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 1.7e-42 176.8 196 58.2
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.7e-42 176.8 194 58.8
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 2.9e-42 176.0 197 57.9
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 2.9e-42 176.0 194 58.2
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 3.8e-42 175.6 197 57.9
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 1.1e-41 174.1 198 57.1
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 1.5e-41 173.7 195 57.4
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 1.9e-41 173.3 197 55.8
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 1.9e-41 173.3 243 49.4
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.5e-41 172.9 194 58.2
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 2.5e-41 172.9 194 57.7
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 5.5e-41 171.8 196 55.6
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 5.5e-41 171.8 194 58.2
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 9.4e-41 171.0 198 56.6
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 1.2e-40 170.6 194 57.7
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 1.2e-40 170.6 197 56.3
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 2.1e-40 169.9 194 56.7
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.7e-40 169.5 194 57.2
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 2.7e-40 169.5 195 58.5
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 3.6e-40 169.1 196 57.1
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 1.4e-39 167.2 194 54.1
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.4e-39 167.2 201 55.7
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 2.3e-39 166.4 197 55.3
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 4.0e-39 165.6 200 54.5
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 4.0e-39 165.6 199 56.3
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 6.8e-39 164.9 198 56.1
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 8.8e-39 164.5 198 54.5
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 8.8e-39 164.5 194 56.7
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 8.8e-39 164.5 194 56.7
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 1.2e-38 164.1 198 54.5
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 1.2e-38 164.1 194 56.7
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 2.0e-38 163.3 203 55.2
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 2.6e-38 162.9 193 53.4
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 4.4e-38 162.2 202 54.0
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 5.7e-38 161.8 196 55.1
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 7.5e-38 161.4 200 53.5
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 1.3e-37 160.6 204 52.9
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 2.2e-37 159.8 195 56.4
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 3.7e-37 159.1 200 53.5
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 3.7e-37 159.1 197 55.8
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 3.7e-37 159.1 199 53.8
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 4.8e-37 158.7 195 54.4
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.8e-36 156.8 199 52.8
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.8e-36 156.8 204 52.5
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 2.4e-36 156.4 195 53.3
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 4.1e-36 155.6 197 53.3
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 5.4e-36 155.2 194 54.1
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 9.1e-36 154.5 197 54.3
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 3.5e-35 152.5 197 53.8
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 3.5e-35 152.5 197 52.3
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 3.5e-35 152.5 202 51.5
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 4.5e-35 152.1 186 52.7
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 7.7e-35 151.4 195 52.3
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 7.7e-35 151.4 197 52.8
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 7.7e-35 151.4 193 53.4
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 1.3e-34 150.6 201 52.7
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 1.7e-34 150.2 197 53.3
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 5.0e-34 148.7 203 52.2
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 6.5e-34 148.3 195 51.3
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 6.5e-34 148.3 195 51.3
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 1.1e-33 147.5 195 51.3
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 1.9e-33 146.7 196 50.5
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 2.5e-33 146.4 195 51.8
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 2.5e-33 146.4 195 51.8
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 3.3e-33 146.0 195 50.8
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 7.2e-33 144.8 195 51.3
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 1.2e-32 144.1 200 51.0
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 1.2e-32 144.1 199 52.3
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 3.6e-32 142.5 132 65.2
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 4.7e-32 142.1 197 49.7
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 4.7e-32 142.1 190 51.6
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 3.0e-31 139.4 199 51.8
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 5.2e-31 138.7 206 48.5
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 2.0e-30 136.7 198 50.0
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 8.3e-29 131.3 147 53.7
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 1.4e-28 130.6 206 46.1
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 1.2e-27 127.5 204 46.1
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 1.0e-26 124.4 200 45.0
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 1.3e-26 124.0 201 47.3
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 5.0e-26 122.1 170 51.8
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 8.6e-26 121.3 160 51.2
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 1.1e-25 120.9 204 44.1
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.5e-25 120.6 161 48.4
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 2.5e-25 119.8 202 42.6
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 9.5e-25 117.9 174 46.0
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 4.7e-24 115.5 199 47.7
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 3.0e-23 112.8 194 42.8
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 5.2e-23 112.1 240 39.2
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 8.9e-23 111.3 202 42.6
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 1.2e-22 110.9 212 42.9
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 2.0e-22 110.2 198 40.9
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 7.5e-22 108.2 202 41.6
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.2e-21 106.7 96 65.6
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 8.3e-21 104.8 87 69.0
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 2.4e-20 103.2 123 54.5
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 5.4e-20 102.1 185 42.7
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 7.0e-20 101.7 149 48.3
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 1.6e-19 100.5 145 46.2
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 2.7e-19 99.8 144 45.1
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 2.7e-19 99.8 182 40.7
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 1.3e-18 97.4 89 64.0
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 5.6e-17 92.0 156 43.6
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 5.2e-15 85.5 135 44.4
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 2.9e-13 79.7 87 52.9
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 4.9e-13 79.0 103 48.5
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 8.3e-13 78.2 115 47.0
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 4.1e-12 75.9 207 37.7
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.2e-11 74.3 55 78.2
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 6.0e-11 72.0 76 50.0
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.2e-08 64.3 90 47.8
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 1.6e-08 63.9 50 72.0
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 2.8e-08 63.2 100 43.0
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 2.8e-08 63.2 100 43.0
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 2.8e-08 63.2 91 46.2
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 6.2e-08 62.0 157 35.0
SHI06070 Sapria himalayana HOM05D005654 ORTHO05D006438 3.1e-07 59.7 86 44.2
FAN24G2610 Fragaria x ananassa HOM05D005654 ORTHO05D006438 6.8e-07 58.5 43 79.1
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 1.2e-06 57.8 86 45.3


User provided reference genes

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