Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 4.5e-86 321.2 165 100.0
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 9.9e-41 170.6 142 64.8
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 4.1e-39 165.2 143 60.8
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 1.3e-37 160.2 138 60.1
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 2.3e-37 159.5 124 66.9
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 3.9e-37 158.7 145 63.4
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 5.1e-37 158.3 140 64.3
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 1.1e-36 157.1 147 63.9
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 1.9e-36 156.4 143 64.3
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 2.5e-36 156.0 138 60.9
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 5.6e-36 154.8 173 53.2
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 2.4e-34 149.4 142 60.6
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 5.2e-34 148.3 134 60.4
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 5.2e-34 148.3 140 56.4
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 1.5e-33 146.7 130 63.1
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 2.6e-33 146.0 149 58.4
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 4.4e-33 145.2 142 59.2
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 7.6e-33 144.4 130 62.3
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 9.9e-33 144.1 141 57.4
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 1.3e-32 143.7 160 53.1
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 2.2e-32 142.9 134 60.4
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 2.9e-32 142.5 148 54.7
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 3.8e-32 142.1 140 56.4
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 4.9e-32 141.7 143 56.6
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 6.4e-32 141.4 134 59.0
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 8.4e-32 141.0 134 59.0
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 1.1e-31 140.6 149 53.0
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.1e-31 140.6 130 57.7
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 1.9e-31 139.8 149 56.4
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.9e-31 139.8 127 65.4
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 4.2e-31 138.7 147 55.8
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 9.3e-31 137.5 146 52.1
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 1.2e-30 137.1 145 57.9
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 1.2e-30 137.1 151 51.7
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 2.7e-30 136.0 135 55.6
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 2.7e-30 136.0 143 54.5
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 3.5e-30 135.6 129 54.3
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 3.5e-30 135.6 141 54.6
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 4.6e-30 135.2 123 56.1
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 6.0e-30 134.8 146 51.4
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 1.3e-29 133.7 138 55.1
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 1.3e-29 133.7 138 55.1
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 2.3e-29 132.9 140 52.1
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 3.0e-29 132.5 160 48.8
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 3.9e-29 132.1 148 49.3
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 3.9e-29 132.1 141 52.5
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 3.9e-29 132.1 131 56.5
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 5.1e-29 131.7 141 51.8
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 5.1e-29 131.7 141 52.5
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 1.5e-28 130.2 102 60.8
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 1.9e-28 129.8 135 53.3
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 2.5e-28 129.4 138 54.3
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 4.3e-28 128.6 148 49.3
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 4.3e-28 128.6 141 53.2
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 4.3e-28 128.6 130 53.8
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 5.6e-28 128.3 130 53.8
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 5.6e-28 128.3 154 50.6
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 7.3e-28 127.9 141 50.4
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 1.6e-27 126.7 126 57.1
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 2.8e-27 125.9 141 53.2
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 3.6e-27 125.6 134 52.2
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 6.2e-27 124.8 142 48.6
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 6.2e-27 124.8 142 54.2
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 8.1e-27 124.4 150 50.7
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 1.1e-26 124.0 131 51.1
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 1.8e-26 123.2 141 53.9
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 2.4e-26 122.9 142 50.7
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 2.4e-26 122.9 142 52.8
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 3.1e-26 122.5 140 47.9
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 6.9e-26 121.3 141 51.8
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 7.6e-25 117.9 143 49.7
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 1.7e-24 116.7 125 49.6
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 2.2e-24 116.3 137 45.3
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 4.9e-24 115.2 107 63.6
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 6.4e-24 114.8 126 53.2
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 3.2e-23 112.5 129 50.4
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 7.1e-23 111.3 132 48.5
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 1.6e-22 110.2 125 49.6
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 4.6e-22 108.6 85 67.1
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.3e-21 107.1 142 44.4
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 3.0e-21 105.9 120 50.0
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 6.7e-21 104.8 140 44.3
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 6.7e-21 104.8 140 44.3
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 1.9e-20 103.2 147 46.3
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 2.5e-20 102.8 147 45.6
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 1.6e-19 100.1 142 45.1
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 8.1e-19 97.8 99 49.5
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.1e-18 97.4 140 42.1
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.4e-18 97.1 99 49.5
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 1.8e-18 96.7 135 43.7
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 3.1e-18 95.9 154 44.8
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 2.2e-16 89.7 149 40.9
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-15 85.9 85 48.2
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 9.3e-15 84.3 103 38.8
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 1.2e-14 84.0 74 54.1
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 1.3e-13 80.5 102 47.1
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 6.7e-13 78.2 100 47.0
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 3.3e-12 75.9 148 35.1
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 9.6e-12 74.3 121 40.5
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 9.0e-10 67.8 77 42.9
CBR_g32195 Chara braunii HOM05D007158 ORTHO05D007424 1.2e-09 67.4 63 50.8
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 2.0e-09 66.6 58 46.6
AL2G15950 Arabidopsis lyrata HOM05D011338 ORTHO05D007424 2.6e-09 66.2 103 32.0
AT1G60640 Arabidopsis thaliana HOM05D007158 ORTHO05D007424 3.4e-09 65.9 57 45.6
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 2.9e-08 62.8 65 41.5
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 2.9e-08 62.8 61 45.9
Sabra10G0082800 Salix brachista HOM05D005274 ORTHO05D006485 4.9e-08 62.0 58 58.6
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 6.5e-08 61.6 91 35.2
BolC1t03688H Brassica oleracea HOM05D011338 ORTHO05D007424 8.4e-08 61.2 56 44.6
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 1.1e-07 60.8 73 39.7
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 1.1e-07 60.8 73 39.7
Sabra02G0148900 Salix brachista HOM05D005274 ORTHO05D006485 1.1e-07 60.8 57 59.6
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 1.1e-07 60.8 54 64.8
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 4.2e-07 58.9 56 57.1
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 4.2e-07 58.9 56 57.1
Sabra07G0113400 Salix brachista HOM05D005274 ORTHO05D006485 7.1e-07 58.2 56 55.4
Thhalv10023615m.g Eutrema salsugineum HOM05D011338 ORTHO05D007424 9.3e-07 57.8 68 33.8
BcaC06g31815 Brassica carinata HOM05D011338 ORTHO05D007424 6.0e-06 55.1 53 41.5


User provided reference genes

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