Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 9.6e-130 466.8 238 100.0
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 4.5e-87 325.1 262 66.8
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 2.7e-84 315.8 245 66.9
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 1.0e-83 313.9 253 65.6
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 1.4e-83 313.5 263 63.9
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 2.3e-83 312.8 251 64.9
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 3.3e-82 308.9 259 62.9
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 7.5e-82 307.8 226 67.7
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 7.5e-82 307.8 261 63.6
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 9.7e-82 307.4 235 66.0
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 1.7e-81 306.6 235 65.5
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 1.7e-81 306.6 261 63.2
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.2e-81 306.2 249 65.1
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 2.8e-81 305.8 258 63.6
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 2.8e-81 305.8 239 65.7
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 2.8e-81 305.8 245 64.9
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 2.8e-81 305.8 213 72.8
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 6.3e-81 304.7 267 65.2
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 1.1e-80 303.9 246 64.2
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 1.1e-80 303.9 251 64.5
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.4e-80 303.5 213 70.0
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 1.8e-80 303.1 254 62.2
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 3.1e-80 302.4 259 63.3
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 5.3e-80 301.6 230 67.8
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.0e-80 301.2 241 65.6
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 7.0e-80 301.2 261 61.3
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 9.1e-80 300.8 259 62.2
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 2.0e-79 299.7 240 66.7
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 2.0e-79 299.7 239 63.6
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 3.5e-79 298.9 259 61.4
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 3.5e-79 298.9 252 60.7
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.5e-79 298.9 235 65.1
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 4.5e-79 298.5 253 63.6
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 4.5e-79 298.5 262 62.2
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 7.7e-79 297.7 238 65.5
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 7.7e-79 297.7 232 66.4
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 2.2e-78 296.2 241 64.7
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.2e-78 296.2 241 64.7
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.2e-78 296.2 258 60.9
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 2.9e-78 295.8 251 61.8
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 3.8e-78 295.4 231 66.2
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 1.1e-77 293.9 262 61.1
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 1.5e-77 293.5 244 62.3
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 2.5e-77 292.7 217 67.3
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 3.2e-77 292.4 236 63.1
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 4.2e-77 292.0 230 63.9
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 4.2e-77 292.0 225 66.2
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.5e-77 291.6 250 62.4
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 7.2e-77 291.2 251 63.3
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 9.4e-77 290.8 258 61.6
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 9.4e-77 290.8 254 65.4
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 1.2e-76 290.4 253 60.1
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 1.2e-76 290.4 232 62.9
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.2e-76 290.4 262 59.9
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 2.1e-76 289.7 221 65.6
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 2.1e-76 289.7 225 66.2
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 2.7e-76 289.3 257 59.5
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 4.7e-76 288.5 204 68.6
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.1e-76 288.1 259 59.5
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.1e-76 288.1 259 59.5
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 6.1e-76 288.1 259 59.8
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 8.0e-76 287.7 208 68.8
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 1.0e-75 287.3 261 59.8
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 3.0e-75 285.8 230 65.2
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 8.8e-75 284.3 216 65.7
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 1.2e-74 283.9 268 56.7
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 1.5e-74 283.5 268 57.8
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 2.0e-74 283.1 242 63.6
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 3.4e-74 282.3 253 61.3
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.4e-74 282.3 193 69.4
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 4.4e-74 282.0 204 66.7
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 4.4e-74 282.0 232 63.4
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 5.7e-74 281.6 199 67.8
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 9.8e-74 280.8 259 57.1
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 3.7e-73 278.9 252 59.9
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 1.6e-71 273.5 236 58.9
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 3.5e-71 272.3 229 60.7
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 4.5e-71 271.9 210 63.8
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 1.7e-70 270.0 228 59.2
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 2.3e-70 269.6 244 57.8
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 2.9e-70 269.2 208 63.0
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.0e-70 268.5 232 61.6
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 6.6e-70 268.1 192 68.2
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 6.6e-70 268.1 251 59.0
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 6.6e-70 268.1 263 55.9
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.1e-69 267.3 265 55.1
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 1.1e-69 267.3 192 67.7
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 1.1e-69 267.3 199 67.8
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 1.5e-69 266.9 205 64.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.9e-69 266.5 250 57.6
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 5.5e-69 265.0 258 57.8
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 5.5e-69 265.0 207 62.8
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 7.2e-69 264.6 253 56.5
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 7.2e-69 264.6 261 55.6
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 9.5e-69 264.2 253 56.1
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.2e-68 263.8 192 67.7
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 1.6e-68 263.5 249 56.2
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 2.1e-68 263.1 254 55.5
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 2.1e-68 263.1 254 55.5
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 2.1e-68 263.1 259 55.2
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 3.6e-68 262.3 244 61.1
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 4.0e-67 258.8 242 59.1
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 5.2e-67 258.5 199 65.3
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 8.9e-67 257.7 229 62.0
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 3.4e-66 255.8 253 54.2
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 5.7e-66 255.0 253 54.2
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.3e-65 253.8 247 58.3
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.1e-64 250.8 194 62.4
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.1e-64 250.8 160 75.6
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 5.9e-63 245.0 194 62.4
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 2.9e-62 242.7 239 55.6
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 8.6e-62 241.1 167 70.1
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 4.3e-61 238.8 157 73.9
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.4e-59 233.8 161 70.2
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 8.9e-59 231.1 233 51.9
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 3.4e-58 229.2 192 57.8
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 5.4e-56 221.9 217 57.6
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 3.5e-55 219.2 256 50.4
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.8e-51 204.9 132 77.3
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 8.9e-51 204.5 263 48.7
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 1.2e-44 184.1 235 39.1
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 4.7e-44 182.2 148 64.2
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 2.7e-39 166.4 117 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 7.8e-39 164.9 227 40.1
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.9e-37 160.2 156 59.0
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 3.3e-37 159.5 131 58.8
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.2e-35 152.1 81 86.4
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 1.2e-34 151.0 99 69.7
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.5e-34 150.6 90 74.4
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 9.2e-32 141.4 102 70.6
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 7.8e-31 138.3 103 67.0
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 4.9e-25 119.0 108 55.6
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.6e-22 108.6 179 38.5
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 2.2e-17 93.6 159 33.3
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 2.4e-16 90.1 61 73.8
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 2.7e-15 86.7 54 77.8
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 2.1e-12 77.0 175 29.1
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 2.4e-11 73.6 128 36.7
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 3.4e-10 69.7 113 41.6
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 3.4e-10 69.7 132 34.8
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 4.5e-10 69.3 133 33.1
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 1.0e-09 68.2 208 26.9
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 1.3e-09 67.8 37 81.1
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 3.8e-09 66.2 151 37.1
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 8.4e-09 65.1 108 39.8
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 3.2e-08 63.2 98 35.7
GSVIVG01007445001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.2e-07 61.2 102 41.2
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 2.1e-07 60.5 67 53.7
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 5.1e-06 55.8 93 35.5


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