Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 0.0e+00 1347.8 686 100.0
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 4.1e-274 948.0 717 73.2
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 2.9e-272 941.8 723 71.1
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 4.9e-267 924.5 724 70.4
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 3.6e-262 908.3 734 68.9
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 6.1e-262 907.5 719 69.4
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 2.0e-257 892.5 717 68.2
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.7e-256 889.4 717 68.6
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 3.0e-256 888.6 716 67.2
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 3.0e-256 888.6 716 68.3
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.5e-255 886.3 729 68.3
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.5e-255 886.3 717 68.6
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.9e-255 885.9 719 67.7
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 8.0e-254 880.6 724 67.0
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.0e-253 880.2 715 67.4
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.4e-253 879.8 715 67.4
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 4.0e-253 878.2 716 67.9
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 3.4e-252 875.2 717 67.2
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.9e-251 872.1 733 66.7
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.4e-250 869.0 713 67.5
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 3.2e-250 868.6 719 66.3
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 3.5e-249 865.1 729 67.1
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.7e-248 862.8 727 66.7
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 2.3e-248 862.4 715 67.6
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 5.0e-248 861.3 724 66.9
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 9.5e-247 857.1 721 67.5
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.6e-246 856.3 721 67.4
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 3.1e-245 852.0 714 66.5
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 6.8e-245 850.9 722 65.7
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 9.8e-244 847.0 728 65.4
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 6.4e-243 844.3 726 66.7
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 8.3e-243 844.0 726 64.5
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.9e-242 842.8 720 66.8
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 7.1e-242 840.9 721 65.7
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.6e-241 839.7 736 64.4
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 2.3e-240 835.9 721 65.6
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 2.5e-239 832.4 715 65.2
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.6e-238 829.7 735 63.9
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.1e-237 827.0 718 65.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 8.9e-237 823.9 718 65.3
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.2e-236 823.5 718 65.2
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.0e-236 822.8 718 65.0
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.6e-236 822.4 718 65.0
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 4.4e-236 821.6 724 64.2
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 7.6e-236 820.8 725 65.5
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 7.6e-236 820.8 718 65.5
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.9e-235 818.9 723 63.9
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 3.9e-232 808.5 803 58.3
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.1e-231 807.0 708 65.0
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.1e-231 807.0 708 64.8
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 9.6e-231 803.9 719 64.5
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 9.6e-231 803.9 708 64.5
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.6e-230 802.0 719 64.4
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 4.0e-229 798.5 712 64.6
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 3.4e-228 795.4 716 63.4
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 9.9e-228 793.9 636 67.6
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 2.7e-225 785.8 729 62.8
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 3.5e-225 785.4 941 52.1
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.0e-224 783.9 724 62.8
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.0e-224 782.3 728 62.8
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 5.1e-224 781.6 725 62.2
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 6.6e-224 781.2 729 60.6
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 8.7e-224 780.8 710 63.0
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 1.1e-223 780.4 733 61.0
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.5e-223 780.0 730 62.6
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 7.3e-223 777.7 732 61.2
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 3.6e-222 775.4 706 61.6
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 4.8e-222 775.0 709 62.2
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 6.2e-222 774.6 706 61.8
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.5e-220 770.0 745 60.8
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 2.6e-220 769.2 720 63.2
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 4.2e-218 761.9 705 62.0
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.8e-216 756.5 725 59.7
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.5e-215 753.4 726 60.3
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 7.4e-215 751.1 716 60.9
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 9.6e-215 750.7 595 69.4
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 4.8e-214 748.4 927 51.3
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 8.1e-214 747.7 724 60.6
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 8.4e-203 711.1 727 57.2
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.4e-202 710.3 720 56.8
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 3.5e-201 705.7 723 58.0
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.0e-200 704.1 772 54.5
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 9.0e-197 691.0 720 56.8
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 7.6e-196 688.0 731 56.1
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.7e-195 686.8 718 56.7
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.7e-195 686.8 721 56.7
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 5.0e-195 685.3 727 56.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 8.5e-195 684.5 721 56.6
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 4.2e-194 682.2 721 56.3
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 8.7e-192 674.5 745 54.6
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 3.3e-191 672.5 747 54.6
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 3.3e-191 672.5 733 54.8
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.4e-189 666.4 592 63.3
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 5.9e-188 661.8 720 55.3
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.3e-183 646.0 576 63.4
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.4e-181 640.6 733 51.6
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 5.9e-180 635.2 624 58.0
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.1e-177 626.7 620 58.1
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 7.9e-177 624.8 732 50.3
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 5.7e-175 618.6 555 64.7
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 3.8e-171 605.9 696 54.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 3.3e-167 592.8 541 61.7
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 7.7e-156 555.1 594 54.2
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 8.0e-145 518.5 596 53.0
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 5.6e-130 469.2 518 54.2
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.1e-121 440.7 765 40.0
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 6.6e-115 419.1 794 37.5
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 1.1e-112 411.8 468 55.6
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 9.0e-104 382.1 705 37.2
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.9e-98 364.4 446 52.0
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.2e-84 318.5 261 65.1
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 6.0e-84 316.2 231 68.8
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.8e-78 297.0 309 57.9
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 6.3e-65 253.1 365 47.4
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 3.6e-60 237.3 286 52.1
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.6e-58 231.1 444 39.0
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.4e-56 225.3 184 66.8
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 1.1e-48 199.1 153 69.9
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 4.4e-42 177.2 126 74.6
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.0e-39 168.3 192 50.0
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 3.8e-38 164.1 133 66.9
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 6.6e-38 163.3 97 82.5
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.9e-37 161.8 103 73.8
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.5e-37 161.4 108 84.3
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.2e-33 148.3 126 61.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 2.9e-30 137.9 144 54.9
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 4.6e-23 114.0 96 61.5
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 5.2e-11 73.9 118 41.5
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 4.1e-08 64.3 145 38.6
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 4.1e-08 64.3 116 39.7
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 1.7e-06 58.9 72 51.4


User provided reference genes

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