Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 0.0e+00 1309.3 641 100.0
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 4.7e-232 808.1 642 62.9
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.4e-206 722.2 645 58.6
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 8.4e-205 717.6 645 58.3
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 8.4e-197 691.0 553 63.8
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.6e-195 686.8 642 55.8
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 1.3e-194 683.7 630 56.0
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 3.3e-193 679.1 630 56.7
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 8.8e-186 654.4 645 52.7
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 2.8e-184 649.4 620 55.2
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 8.5e-181 637.9 645 53.0
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 1.1e-180 637.5 646 52.8
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.6e-179 633.6 648 51.7
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 6.7e-178 628.2 643 52.3
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.1e-177 627.5 644 53.0
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 2.6e-174 616.3 572 57.7
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 7.2e-172 608.2 648 50.6
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 2.3e-170 603.2 652 49.7
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 3.0e-170 602.8 648 48.9
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.1e-169 600.9 646 50.0
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 1.5e-169 600.5 614 50.7
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 5.7e-169 598.6 652 47.5
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 7.4e-169 598.2 601 52.6
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 3.1e-167 592.8 646 49.8
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 3.1e-167 592.8 646 50.0
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 4.5e-166 589.0 639 49.6
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 1.3e-165 587.4 644 48.6
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.7e-165 587.0 550 57.3
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.7e-165 587.0 630 48.9
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 1.9e-164 583.6 570 54.4
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 1.6e-163 580.5 645 48.2
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 4.0e-162 575.9 612 48.9
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 4.0e-162 575.9 644 48.8
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 5.2e-162 575.5 628 47.9
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 7.5e-161 571.6 634 47.6
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.2e-160 570.1 639 49.1
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 3.7e-160 569.3 628 47.6
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 3.7e-160 569.3 584 52.1
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 8.2e-160 568.2 643 49.3
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 1.2e-158 564.3 614 47.6
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 1.2e-158 564.3 614 47.6
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.0e-157 561.2 546 52.7
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 1.3e-157 560.8 594 49.0
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 5.0e-157 558.9 614 47.4
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 9.4e-156 554.7 651 44.7
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.6e-155 553.9 649 48.2
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 2.3e-154 550.1 621 46.7
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 5.2e-154 548.9 639 47.1
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.4e-153 545.8 649 47.9
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 1.7e-152 543.9 652 48.2
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.8e-152 543.1 652 48.3
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 4.5e-150 535.8 646 45.7
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.0e-149 534.6 583 49.7
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 9.8e-145 518.1 618 46.6
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 4.9e-144 515.8 647 45.9
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 9.2e-143 511.5 636 45.6
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 2.9e-141 506.5 623 44.5
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 8.0e-139 498.4 647 42.3
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 2.3e-138 496.9 622 44.5
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 1.5e-137 494.2 598 45.2
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 2.6e-137 493.4 617 43.3
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.2e-136 490.3 643 43.1
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 9.2e-135 485.0 615 43.3
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 5.6e-132 475.7 620 43.9
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 1.2e-131 474.6 631 41.7
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 2.8e-131 473.4 647 41.1
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 3.6e-131 473.0 631 41.7
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 3.1e-130 469.9 654 42.5
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 3.4e-129 466.5 616 42.4
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 2.4e-127 460.3 648 41.4
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 1.2e-123 448.0 647 41.1
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 3.6e-123 446.4 646 41.5
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 8.1e-123 445.3 647 42.0
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 5.2e-122 442.6 588 42.5
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 2.0e-121 440.7 630 39.5
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 8.6e-117 425.2 652 39.6
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 8.6e-117 425.2 649 38.8
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 1.4e-114 417.9 471 46.9
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 4.0e-114 416.4 517 43.3
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 2.5e-108 397.1 614 38.4
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 1.4e-106 391.3 606 38.6
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 4.4e-105 386.3 579 39.4
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.7e-104 384.4 565 41.6
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 3.5e-102 376.7 628 38.9
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.1e-100 371.7 580 39.1
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.6e-94 351.3 577 39.0
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 8.7e-93 345.5 653 33.5
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 1.5e-92 344.7 653 33.4
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 5.6e-92 342.8 585 37.4
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 4.5e-89 333.2 540 37.8
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 3.3e-84 317.0 577 35.0
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.6e-83 314.7 382 42.7
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 1.0e-80 305.4 559 36.1
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 3.9e-77 293.5 513 34.7
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 8.7e-77 292.4 614 32.1
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.2e-51 208.0 389 34.2
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 8.2e-51 206.1 390 34.9
unitig_736.g22373 Utricularia gibba HOM05D006144 ORTHO05D006357 5.9e-41 173.3 260 38.5
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 4.4e-28 130.6 403 29.5
unitig_736.g22374 Utricularia gibba HOM05D006144 ORTHO05D006357 9.8e-28 129.4 228 36.0
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 1.1e-23 115.9 391 26.3
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 6.4e-19 100.1 623 22.5
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 1.2e-17 95.9 147 34.0
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 1.6e-17 95.5 219 31.1
GSVIVG01002722001 Vitis vinifera HOM05D006144 ORTHO05D006357 1.3e-16 92.4 106 42.5
Sabra05G0109200 Salix brachista HOM05D006144 ORTHO05D006357 2.8e-14 84.7 194 34.0
Sc11g0005350 Simmondsia chinensis HOM05D006144 ORTHO05D006357 2.8e-14 84.7 138 36.2
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 5.2e-13 80.5 369 24.7
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 2.4e-10 71.6 213 28.6
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 4.1e-10 70.9 190 30.5
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 5.4e-10 70.5 125 35.2
TPR.G19009 Trifolium pratense HOM05D006144 ORTHO05D006357 5.4e-10 70.5 122 34.4


User provided reference genes

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