Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A110T81 Lonicera japonica HOM05D004994 ORTHO05D006359 1.2e-49 199.5 101 100.0
CSS0023109 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 1.6e-25 119.4 86 70.9
Dinv33769 Davidia involucrata HOM05D004994 ORTHO05D006359 2.7e-25 118.6 86 70.9
CSS0046814 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 3.6e-25 118.2 86 69.8
Dinv11519 Davidia involucrata HOM05D004994 ORTHO05D006359 4.6e-25 117.9 87 71.3
COL.COLO4_08441 Corchorus olitorius HOM05D004994 ORTHO05D006359 6.1e-25 117.5 80 71.2
Actinidia38767 Actinidia chinensis HOM05D004994 ORTHO05D006359 1.8e-24 115.9 86 68.6
Cpa.g.sc1691.1 Carica papaya HOM05D004994 ORTHO05D006359 6.7e-24 114.0 87 70.1
vmacro18188 Vaccinium macrocarpon HOM05D004994 ORTHO05D006359 1.1e-23 113.2 86 65.1
Cc07_g03440 Coffea canephora HOM05D004994 ORTHO05D006359 4.3e-23 111.3 85 62.4
Duzib147G1333 Durio zibethinus HOM05D004994 ORTHO05D006359 4.3e-23 111.3 82 65.9
Actinidia17553 Actinidia chinensis HOM05D004994 ORTHO05D006359 9.7e-23 110.2 86 68.6
Lju41A14T30 Lonicera japonica HOM05D004994 ORTHO05D006359 1.7e-22 109.4 85 63.5
CiPaw.03G025700 Carya illinoinensis HOM05D004994 ORTHO05D006359 2.2e-22 109.0 87 65.5
Duzib187G1623 Durio zibethinus HOM05D004994 ORTHO05D006359 2.2e-22 109.0 81 63.0
Glyma.18G260200 Glycine max HOM05D004994 ORTHO05D006359 2.2e-22 109.0 87 69.0
MD09G1052100 Malus domestica HOM05D004994 ORTHO05D006359 2.2e-22 109.0 75 72.0
GSVIVG01011430001 Vitis vinifera HOM05D004994 ORTHO05D006359 2.2e-22 109.0 85 65.9
MSTRG.3242 Avicennia marina HOM05D004994 ORTHO05D006359 4.8e-22 107.8 86 64.0
Ciclev10012215m.g Citrus clementina HOM05D004994 ORTHO05D006359 6.3e-22 107.5 87 65.5
Gorai.007G079100 Gossypium raimondii HOM05D004994 ORTHO05D006359 6.3e-22 107.5 80 66.2
Glyma.09G237300 Glycine max HOM05D004994 ORTHO05D006359 8.2e-22 107.1 87 67.8
Sp2g17620 Schrenkiella parvula HOM05D004994 ORTHO05D006359 8.2e-22 107.1 86 65.1
Thhalv10004712m.g Eutrema salsugineum HOM05D004994 ORTHO05D006359 1.1e-21 106.7 86 65.1
Rhsim08G0070200 Rhododendron simsii HOM05D004994 ORTHO05D006359 1.1e-21 106.7 86 64.0
SGA_v2.0_scaffold90G27627 Striga asiatica HOM05D004994 ORTHO05D006359 1.1e-21 106.7 86 65.1
Cfa007567 Carpinus fangiana HOM05D004994 ORTHO05D006359 1.4e-21 106.3 87 66.7
Phvul.008G036800 Phaseolus vulgaris HOM05D004994 ORTHO05D006359 1.4e-21 106.3 87 64.4
Gohir.A11G069700 Gossypium hirsutum HOM05D004994 ORTHO05D006359 1.8e-21 105.9 80 65.0
Eucgr.J01350 Eucalyptus grandis HOM05D004994 ORTHO05D006359 4.1e-21 104.8 100 58.0
CiPaw.04G016600 Carya illinoinensis HOM05D004994 ORTHO05D006359 5.3e-21 104.4 87 65.5
Medtr7g010920 Medicago truncatula HOM05D004994 ORTHO05D006359 5.3e-21 104.4 87 65.5
VMungo1383G3357 Vigna mungo HOM05D004994 ORTHO05D006359 6.9e-21 104.0 87 65.5
THA.LOC104805471 Tarenaya hassleriana HOM05D004994 ORTHO05D006359 9.1e-21 103.6 87 63.2
Hma1.2p1_0409F.1_g146890 Hydrangea macrophylla HOM05D004994 ORTHO05D006359 1.5e-20 102.8 86 60.5
Lj1g0010103 Lotus japonicus HOM05D004994 ORTHO05D006359 3.4e-20 101.7 87 64.4
Thecc.04G083400 Theobroma cacao HOM05D004994 ORTHO05D006359 3.4e-20 101.7 75 68.0
Gorai.012G053600 Gossypium raimondii HOM05D004994 ORTHO05D006359 5.9e-20 100.9 82 63.4
TPR.G33585 Trifolium pratense HOM05D004994 ORTHO05D006359 7.7e-20 100.5 87 63.2
arahy.Tifrunner.gnm1.ann1.87XTYU Arachis hypogaea HOM05D004994 ORTHO05D006359 1.0e-19 100.1 87 62.1
PGR083G2047 Punica granatum HOM05D004994 ORTHO05D006359 1.0e-19 100.1 70 71.4
Atru.chr8.179 Acer truncatum HOM05D004994 ORTHO05D006359 1.7e-19 99.4 78 65.4
Carub.0005s0755 Capsella rubella HOM05D004994 ORTHO05D006359 1.7e-19 99.4 85 61.2
DCAR_011091 Daucus carota HOM05D004994 ORTHO05D006359 1.7e-19 99.4 88 60.2
HanXRQChr09g0265211 Helianthus annuus HOM05D004994 ORTHO05D006359 2.2e-19 99.0 86 60.5
QL02p082399 Quercus lobata HOM05D004994 ORTHO05D006359 3.8e-19 98.2 87 64.4
A06p40210 Brassica napus HOM05D004994 ORTHO05D006359 5.0e-19 97.8 88 60.2
BraA06t26936Z Brassica rapa HOM05D004994 ORTHO05D006359 5.0e-19 97.8 88 60.2
Ca_02909_v3 Cicer arietinum L. HOM05D004994 ORTHO05D006359 5.0e-19 97.8 89 62.9
CANSAT64G0414 Cannabis sativa HOM05D004994 ORTHO05D006359 6.5e-19 97.4 80 63.8
AL5G18820 Arabidopsis lyrata HOM05D004994 ORTHO05D006359 1.4e-18 96.3 69 71.0
AT3G28970 Arabidopsis thaliana HOM05D004994 ORTHO05D006359 1.4e-18 96.3 85 58.8
Oeu027852.1 Olea europaea HOM05D004994 ORTHO05D006359 1.9e-18 95.9 75 64.0
Oeu027854.1 Olea europaea HOM05D004994 ORTHO05D006359 1.9e-18 95.9 75 64.0
CARHR152070 Cardamine hirsuta HOM05D004994 ORTHO05D006359 2.5e-18 95.5 86 59.3
FAN02G2251 Fragaria x ananassa HOM05D004994 ORTHO05D006359 2.5e-18 95.5 75 62.7
Migut.H00929 Erythranthe guttata HOM05D004994 ORTHO05D006359 7.2e-18 94.0 86 57.0
Sc10g0003560 Simmondsia chinensis HOM05D004994 ORTHO05D006359 7.2e-18 94.0 75 61.3
FAN09G3433 Fragaria x ananassa HOM05D004994 ORTHO05D006359 9.4e-18 93.6 75 61.3
FvH4_6g48370 Fragaria vesca HOM05D004994 ORTHO05D006359 1.2e-17 93.2 75 62.7
FAN14G4158 Fragaria x ananassa HOM05D004994 ORTHO05D006359 1.2e-17 93.2 75 62.7
Lsat_1_v5_gn_3_100161 Lactuca sativa HOM05D004994 ORTHO05D006359 1.2e-17 93.2 86 57.0
RcHm_v2.0_Chr2g0168311 Rosa chinensis HOM05D004994 ORTHO05D006359 1.6e-17 92.8 75 60.0
Hund13212 Selenicereus undatus HOM05D004994 ORTHO05D006359 1.6e-17 92.8 87 57.5
Potri.017G084300 Populus trichocarpa HOM05D004994 ORTHO05D006359 2.1e-17 92.4 69 66.7
SalBow1G0614 Salvia bowleyana HOM05D004994 ORTHO05D006359 2.7e-17 92.0 86 57.0
PGSC0003DMG400001423 Solanum tuberosum HOM05D004994 ORTHO05D006359 2.7e-17 92.0 95 54.7
Manes.02G047000 Manihot esculenta HOM05D004994 ORTHO05D006359 3.6e-17 91.7 70 70.0
Solyc02g088010.3 Solanum lycopersicum HOM05D004994 ORTHO05D006359 3.6e-17 91.7 95 53.7
SalBow1G7872 Salvia bowleyana HOM05D004994 ORTHO05D006359 4.7e-17 91.3 86 55.8
Potri.004G122100 Populus trichocarpa HOM05D004994 ORTHO05D006359 7.9e-17 90.5 86 58.1
FAN05G1406 Fragaria x ananassa HOM05D004994 ORTHO05D006359 1.4e-16 89.7 75 60.0
ClCG09G018190 Citrullus lanatus HOM05D004994 ORTHO05D006359 1.8e-16 89.4 86 57.0
TAR374G0051 Trochodendron aralioides HOM05D004994 ORTHO05D006359 3.0e-16 88.6 87 60.9
MELO3C021990.2 Cucumis melo HOM05D004994 ORTHO05D006359 6.7e-16 87.4 82 58.5
CAN.G206.156 Capsicum annuum HOM05D004994 ORTHO05D006359 1.1e-15 86.7 96 53.1
CsaV3_5G038070 Cucumis sativus L. HOM05D004994 ORTHO05D006359 1.5e-15 86.3 82 58.5
Lalb_Chr04g0258601 Lupinus albus HOM05D004994 ORTHO05D006359 2.6e-15 85.5 87 54.0
Nitab4.5_0000564g0010 Nicotiana tabacum HOM05D004994 ORTHO05D006359 3.3e-15 85.1 120 42.5
FAN14G4526 Fragaria x ananassa HOM05D004994 ORTHO05D006359 5.7e-15 84.3 70 61.4
TAR629G2463 Trochodendron aralioides HOM05D004994 ORTHO05D006359 7.4e-15 84.0 91 58.2
C07p37900 Brassica napus HOM05D004994 ORTHO05D006359 1.3e-14 83.2 51 78.4
Nitab4.5_0002980g0100 Nicotiana tabacum HOM05D004994 ORTHO05D006359 1.3e-14 83.2 125 40.8
unitig_21.g20929 Utricularia gibba HOM05D004994 ORTHO05D006359 1.3e-14 83.2 86 52.3
Sabra04G0090700 Salix brachista HOM05D004994 ORTHO05D006359 2.2e-14 82.4 98 52.0
ECA232G4685 Erigeron canadensis HOM05D004994 ORTHO05D006359 6.3e-14 80.9 86 54.7
Haze_14520 Corylus avellana HOM05D000513 ORTHO05D005338 8.2e-14 80.5 44 84.1
Ah.10g031580 Amaranthus hybridus HOM05D004994 ORTHO05D006359 3.1e-13 78.6 83 55.4
Sed0013315 Sechium edule HOM05D004994 ORTHO05D006359 1.6e-12 76.3 83 55.4
HanXRQChr13g0399841 Helianthus annuus HOM05D004994 ORTHO05D006359 2.6e-12 75.5 87 48.3
AUR62034404 Chenopodium quinoa HOM05D004994 ORTHO05D006359 5.9e-12 74.3 51 68.6
Gohir.A05G367000 Gossypium hirsutum HOM05D004994 ORTHO05D006359 3.8e-11 71.6 53 71.7
Nn3g17257 Nelumbo nucifera HOM05D004994 ORTHO05D006359 3.8e-11 71.6 68 58.8
Gohir.A05G366750 Gossypium hirsutum HOM05D004994 ORTHO05D006359 6.5e-11 70.9 53 69.8
AUR62039809 Chenopodium quinoa HOM05D004994 ORTHO05D006359 1.1e-10 70.1 51 64.7
Peaxi162Scf00129g00125 Petunia axillaris HOM05D004994 ORTHO05D006359 1.1e-10 70.1 70 55.7
PSO832G1119 Papaver somniferum HOM05D004994 ORTHO05D006359 4.2e-10 68.2 61 60.7
Psat0s1002g0160 Pisum sativum HOM05D004994 ORTHO05D006359 1.2e-09 66.6 41 75.6
Duzib264G0898 Durio zibethinus HOM05D004994 ORTHO05D006359 1.6e-09 66.2 55 60.0
ECA246G4730 Erigeron canadensis HOM05D004994 ORTHO05D006359 2.1e-09 65.9 98 42.9
PSO013G0402 Papaver somniferum HOM05D004994 ORTHO05D006359 3.6e-09 65.1 61 59.0
unitig_899.g15525 Utricularia gibba HOM05D004994 ORTHO05D006359 3.6e-09 65.1 73 47.9
Prupe.3G266600 Prunus persica HOM05D004994 ORTHO05D006359 8.0e-09 63.9 32 87.5
Gohir.D04G048100 Gossypium hirsutum HOM05D004994 ORTHO05D006359 1.8e-08 62.8 53 66.0
PSO017G6367 Papaver somniferum HOM05D004994 ORTHO05D006359 4.0e-08 61.6 65 52.3
Aqoxy3G03411 Aquilegia oxysepala HOM05D004994 ORTHO05D006359 1.1e-07 60.1 64 56.2
PSO478G2065 Papaver somniferum HOM05D004994 ORTHO05D006359 3.3e-07 58.5 65 50.8
TWI60G0928 Tripterygium wilfordii HOM05D004994 ORTHO05D006359 1.3e-06 56.6 61 57.4
Actinidia38785 Actinidia chinensis HOM05D004994 ORTHO05D006359 1.7e-06 56.2 26 92.3
MBI13_g07146_MAGBIO Magnolia biondii HOM05D004994 ORTHO05D048539 3.7e-06 55.1 40 67.5
Os07g0631000 Oryza sativa ssp. japonica HOM05D004994 ORTHO05D006359 3.7e-06 55.1 61 50.8


User provided reference genes

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