Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 1.2e-61 239.6 112 100.0
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 1.5e-40 169.5 112 71.4
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 6.5e-36 154.1 112 64.3
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 4.7e-34 147.9 111 60.4
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 4.7e-34 147.9 117 62.4
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 2.3e-33 145.6 111 59.5
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 3.9e-33 144.8 115 62.6
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 1.1e-32 143.3 112 60.7
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 2.0e-32 142.5 112 59.8
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 5.7e-32 141.0 112 58.9
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 5.7e-32 141.0 112 58.0
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 4.1e-30 134.8 112 58.0
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 5.3e-30 134.4 110 52.7
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 5.3e-30 134.4 112 53.6
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 6.9e-30 134.0 112 57.1
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 9.1e-30 133.7 120 54.2
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 9.1e-30 133.7 112 56.2
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 2.0e-29 132.5 112 55.4
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 4.5e-29 131.3 112 55.4
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 5.9e-29 131.0 112 55.4
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 1.0e-28 130.2 114 54.4
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 1.0e-28 130.2 112 53.6
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 1.7e-28 129.4 111 51.4
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 2.2e-28 129.0 110 51.8
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 2.9e-28 128.6 111 51.4
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 3.8e-28 128.3 112 52.7
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 3.8e-28 128.3 112 53.6
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 3.8e-28 128.3 112 55.4
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 2.5e-27 125.6 109 56.0
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 3.2e-27 125.2 109 50.5
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 3.2e-27 125.2 112 53.6
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 4.2e-27 124.8 112 51.8
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 51.8
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 1.2e-26 123.2 112 50.9
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.2e-26 123.2 112 50.0
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 1.6e-26 122.9 109 52.3
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.7e-26 122.1 112 54.5
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 3.6e-26 121.7 112 50.9
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 3.6e-26 121.7 112 54.5
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 3.6e-26 121.7 112 54.5
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 4.7e-26 121.3 111 52.3
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 4.7e-26 121.3 112 50.9
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 1.0e-25 120.2 112 54.5
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 1.0e-25 120.2 113 50.4
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 1.8e-25 119.4 112 51.8
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 2.3e-25 119.0 112 49.1
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 2.3e-25 119.0 112 50.0
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 5.2e-25 117.9 111 53.2
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 5.2e-25 117.9 112 50.0
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 8.8e-25 117.1 112 50.9
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 3.3e-24 115.2 109 48.6
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 1.3e-23 113.2 111 49.5
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 1.3e-23 113.2 106 49.1
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.7e-23 112.8 109 51.4
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 1.7e-23 112.8 113 47.8
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 2.2e-23 112.5 112 48.2
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 2.8e-23 112.1 112 48.2
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 2.8e-23 112.1 115 51.3
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 3.7e-23 111.7 112 48.2
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 3.7e-23 111.7 114 51.8
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 3.7e-23 111.7 112 46.4
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 4.8e-23 111.3 109 51.4
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 8.2e-23 110.5 114 47.4
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 1.1e-22 110.2 112 46.4
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 1.4e-22 109.8 112 47.3
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 1.4e-22 109.8 112 47.3
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 1.8e-22 109.4 112 46.4
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 1.8e-22 109.4 111 45.9
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 1.8e-22 109.4 109 43.1
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 1.8e-22 109.4 109 43.1
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 2.4e-22 109.0 107 47.7
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 3.1e-22 108.6 111 47.7
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 3.1e-22 108.6 98 50.0
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 3.1e-22 108.6 108 43.5
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 3.1e-22 108.6 113 47.8
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 3.5e-21 105.1 112 44.6
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 3.5e-21 105.1 112 46.4
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 3.5e-21 105.1 112 46.4
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 4.5e-21 104.8 102 50.0
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 7.7e-21 104.0 112 44.6
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 7.7e-21 104.0 98 48.0
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 1.7e-20 102.8 112 46.4
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 2.2e-20 102.4 69 63.8
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 1.5e-19 99.8 117 45.3
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 1.9e-19 99.4 111 44.1
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 2.5e-19 99.0 114 46.5
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 1.2e-18 96.7 112 41.1
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 4.7e-18 94.7 69 59.4
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 3.0e-17 92.0 76 57.9
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 1.3e-15 86.7 81 45.7
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.4e-14 83.2 77 50.6
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 1.8e-14 82.8 66 50.0
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 3.2e-11 72.0 68 51.5
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 3.2e-11 72.0 64 56.2
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 6.1e-10 67.8 68 50.0
AUR62038525 Chenopodium quinoa HOM05D007557 ORTHO05D000493 1.4e-09 66.6 53 58.5
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 1.8e-09 66.2 109 32.1
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 3.4e-08 62.0 56 53.6
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 3.4e-08 62.0 56 53.6


User provided reference genes

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