Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 5.5e-229 797.3 420 100.0
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.3e-185 653.3 383 85.9
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 3.7e-185 651.7 424 80.0
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 8.3e-185 650.6 421 79.6
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 1.8e-184 649.4 413 83.3
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.7e-182 642.9 422 78.0
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 2.5e-181 639.0 422 78.4
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 3.3e-181 638.6 382 82.7
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.7e-180 634.8 376 84.8
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 9.5e-157 557.4 381 71.9
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 6.8e-155 551.2 382 72.5
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 8.4e-153 544.3 379 72.0
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 7.8e-151 537.7 377 72.1
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.3e-150 537.0 389 70.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.7e-150 536.6 379 71.5
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 1.7e-150 536.6 382 71.7
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.1e-149 533.9 420 65.5
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 2.5e-149 532.7 382 69.4
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.4e-147 526.9 420 65.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 1.4e-147 526.9 379 69.9
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 5.2e-147 525.0 382 69.6
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.2e-147 525.0 382 69.6
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.2e-147 525.0 382 69.6
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 5.2e-147 525.0 378 71.2
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 9.0e-147 524.2 379 68.6
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.6e-146 522.7 382 69.1
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 5.8e-146 521.5 384 70.1
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 5.8e-146 521.5 374 70.9
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 9.9e-146 520.8 383 70.5
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 1.3e-145 520.4 368 70.9
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 8.4e-145 517.7 375 70.9
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.1e-144 517.3 378 69.6
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 6.6e-142 508.1 371 70.1
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.9e-141 506.5 415 65.3
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.5e-141 506.1 382 67.5
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.8e-140 502.7 380 67.6
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 8.1e-140 501.1 380 67.6
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.1e-139 500.7 375 66.9
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.4e-139 500.4 383 66.8
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 1.8e-139 500.0 376 67.6
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 4.0e-139 498.8 380 67.6
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 1.2e-138 497.3 382 66.8
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 9.9e-138 494.2 377 67.4
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 9.3e-136 487.6 379 65.4
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.6e-135 486.9 288 83.3
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 6.7e-134 481.5 377 65.3
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 1.5e-133 480.3 377 65.3
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 2.5e-133 479.6 379 63.3
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 1.6e-132 476.9 379 62.8
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 2.8e-132 476.1 387 62.3
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 1.4e-131 473.8 403 62.8
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 6.9e-131 471.5 389 63.0
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.2e-130 470.7 374 63.4
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 8.4e-129 464.5 381 64.3
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 7.1e-128 461.5 378 62.4
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 9.3e-128 461.1 381 63.5
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 2.1e-127 459.9 382 62.6
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.3e-126 457.2 380 62.1
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.8e-126 456.8 380 61.1
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.5e-125 453.8 317 72.2
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 9.6e-125 451.1 317 71.6
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 1.3e-124 450.7 384 62.5
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.6e-124 450.3 379 61.5
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.1e-123 447.6 374 62.6
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 3.4e-122 442.6 382 61.8
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 4.5e-122 442.2 376 60.9
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 2.2e-121 439.9 413 56.7
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.2e-120 435.6 367 60.8
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 7.9e-119 431.4 332 64.8
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 3.9e-118 429.1 413 58.6
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 3.9e-118 429.1 363 62.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 1.6e-116 423.7 376 59.8
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.8e-116 422.9 352 61.4
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 1.0e-113 414.5 330 63.0
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 8.5e-113 411.4 378 57.7
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 5.1e-110 402.1 385 57.1
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 5.1e-102 375.6 391 52.7
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.2e-100 370.2 309 60.8
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 1.3e-97 360.9 242 74.8
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 4.7e-95 352.4 241 74.3
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.8e-75 287.3 258 61.2
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 5.0e-73 279.3 223 64.1
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 7.2e-72 275.4 410 41.7
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 6.6e-65 252.3 411 37.7
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 6.1e-63 245.7 372 39.8
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 5.4e-59 232.6 204 60.3
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.9e-51 207.6 165 66.7
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 2.7e-50 203.8 168 63.7
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 4.6e-50 203.0 218 53.2
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 4.0e-38 163.3 116 67.2
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.9e-36 157.1 125 62.4
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 1.4e-14 85.1 82 51.2
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 3.8e-12 77.0 63 66.7
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 1.4e-11 75.1 289 26.3
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 9.3e-11 72.4 74 52.7
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 1.6e-10 71.6 57 70.2
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 2.1e-10 71.2 347 22.8
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 6.0e-10 69.7 49 63.3
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 8.7e-09 65.9 43 69.8
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 5.6e-08 63.2 57 61.4
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 2.4e-06 57.8 224 26.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 9.0e-06 55.8 182 25.3
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 9.0e-06 55.8 414 23.4


User provided reference genes

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