Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0018744 Lotus japonicus HOM05D007995 ORTHO05D001819 3.4e-98 361.7 184 100.0
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 6.7e-38 161.4 176 51.1
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 6.7e-38 161.4 176 51.1
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.3e-37 159.1 178 51.7
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 3.3e-37 159.1 181 49.2
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 3.3e-37 159.1 181 48.6
Lalb_Chr16g0386271 Lupinus albus HOM05D007995 ORTHO05D001819 1.6e-36 156.8 186 50.0
Lalb_Chr04g0256671 Lupinus albus HOM05D007995 ORTHO05D001819 1.5e-34 150.2 187 47.1
Lalb_Chr16g0386301 Lupinus albus HOM05D007995 ORTHO05D001819 3.4e-34 149.1 186 45.7
TPR.G36428 Trifolium pratense HOM05D007995 ORTHO05D001819 1.3e-33 147.1 178 48.3
Medtr8g032810 Medicago truncatula HOM05D007995 ORTHO05D001819 1.6e-31 140.2 178 43.3
Lalb_Chr16g0386251 Lupinus albus HOM05D007995 ORTHO05D001819 3.5e-31 139.0 171 46.8
Medtr6g024040 Medicago truncatula HOM05D007995 ORTHO05D001819 6.1e-31 138.3 182 46.2
Lalb_Chr14g0367641 Lupinus albus HOM05D007995 ORTHO05D001819 6.7e-30 134.8 178 43.3
TPR.G32889 Trifolium pratense HOM05D007995 ORTHO05D001819 8.7e-30 134.4 178 43.8
TPR.G16193 Trifolium pratense HOM05D007995 ORTHO05D001819 4.3e-29 132.1 177 42.9
TPR.G28273 Trifolium pratense HOM05D007995 ORTHO05D001819 9.7e-29 131.0 177 41.8
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 2.2e-28 129.8 174 43.7
TPR.G30439 Trifolium pratense HOM05D007995 ORTHO05D001819 4.8e-28 128.6 178 43.8
Medtr4g025010 Medicago truncatula HOM05D007995 ORTHO05D001819 8.2e-28 127.9 175 41.7
Medtr6g023905 Medicago truncatula HOM05D007995 ORTHO05D001819 8.2e-28 127.9 175 44.0
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.1e-27 127.5 157 49.7
Lalb_Chr22g0356001 Lupinus albus HOM05D007995 ORTHO05D001819 1.1e-27 127.5 158 46.8
Lalb_Chr22g0356081 Lupinus albus HOM05D007995 ORTHO05D001819 1.4e-27 127.1 177 41.8
TPR.G33129 Trifolium pratense HOM05D007995 ORTHO05D001819 1.4e-27 127.1 178 42.7
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 2.4e-27 126.3 174 45.4
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 3.1e-27 125.9 175 44.0
Psat1g140040 Pisum sativum HOM05D007995 ORTHO05D001819 6.9e-27 124.8 169 42.0
TPR.G16188 Trifolium pratense HOM05D007995 ORTHO05D001819 2.6e-26 122.9 173 41.6
Medtr6g024020 Medicago truncatula HOM05D007995 ORTHO05D001819 4.5e-26 122.1 179 41.9
Psat3g149840 Pisum sativum HOM05D007995 ORTHO05D001819 1.0e-25 120.9 176 44.9
TPR.G30442 Trifolium pratense HOM05D007995 ORTHO05D001819 2.9e-25 119.4 176 41.5
Psat1g086800 Pisum sativum HOM05D007995 ORTHO05D001819 6.5e-25 118.2 177 41.2
Medtr6g023995 Medicago truncatula HOM05D007995 ORTHO05D001819 8.5e-25 117.9 155 43.2
Medtr6g024035 Medicago truncatula HOM05D007995 ORTHO05D001819 1.4e-24 117.1 179 43.6
Ca_31346_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 4.2e-24 115.5 182 37.9
Ca_17116_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.5e-24 115.2 177 41.2
Ca_14013_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.2e-23 114.0 177 38.4
Ca_31352_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.2e-23 114.0 182 37.4
arahy.Tifrunner.gnm1.ann1.8T8NTE Arachis hypogaea HOM05D007995 ORTHO05D001819 2.7e-23 112.8 182 39.6
Ca_30953_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 7.9e-23 111.3 182 38.5
Ca_26896_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.0e-22 110.9 161 40.4
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 1.0e-22 110.9 177 39.5
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 6.7e-22 108.2 187 38.5
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 4.3e-21 105.5 177 36.7
Lalb_Chr16g0386281 Lupinus albus HOM05D007995 ORTHO05D001819 1.3e-20 104.0 131 44.3
Medtr6g024185 Medicago truncatula HOM05D007995 ORTHO05D001819 4.8e-20 102.1 170 39.4
Lalb_Chr14g0366261 Lupinus albus HOM05D007995 ORTHO05D001819 1.2e-18 97.4 187 34.8
Medtr6g024180 Medicago truncatula HOM05D007995 ORTHO05D001819 1.2e-18 97.4 175 38.3
Medtr6g024195 Medicago truncatula HOM05D007995 ORTHO05D001819 1.5e-18 97.1 178 35.4
Psat1g087920 Pisum sativum HOM05D007995 ORTHO05D001819 2.0e-18 96.7 185 39.5
Ca_28343_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.4e-18 95.9 179 37.4
Lalb_Chr14g0366251 Lupinus albus HOM05D007995 ORTHO05D001819 3.4e-18 95.9 173 35.3
TPR.G18497 Trifolium pratense HOM05D007995 ORTHO05D001819 5.9e-18 95.1 124 40.3
Medtr5g095680 Medicago truncatula HOM05D007995 ORTHO05D001819 8.5e-17 91.3 177 33.9
TPR.G22073 Trifolium pratense HOM05D007995 ORTHO05D001819 1.9e-16 90.1 175 35.4
Medtr6g025520 Medicago truncatula HOM05D007995 ORTHO05D001819 7.2e-16 88.2 183 32.8
Medtr0155s0080 Medicago truncatula HOM05D007995 ORTHO05D001819 9.4e-16 87.8 185 35.1
Medtr6g024060 Medicago truncatula HOM05D007995 ORTHO05D001819 3.3e-13 79.3 179 32.4
Medtr6g024075 Medicago truncatula HOM05D007995 ORTHO05D001819 3.3e-13 79.3 179 32.4
Medtr6g023895 Medicago truncatula HOM05D007995 ORTHO05D001819 1.3e-12 77.4 80 58.8
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-12 76.6 179 30.7
Medtr6g025560 Medicago truncatula HOM05D007995 ORTHO05D001819 2.2e-12 76.6 180 33.9
Medtr6g025580 Medicago truncatula HOM05D007995 ORTHO05D001819 2.8e-12 76.3 180 33.3
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 2.8e-12 76.3 182 32.4
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.8e-12 75.5 174 29.9
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.8e-12 75.5 164 30.5
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.8e-12 75.5 164 30.5
arahy.Tifrunner.gnm1.ann1.I3WRP4 Arachis hypogaea HOM05D007995 ORTHO05D001819 6.3e-12 75.1 145 32.4
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.2e-12 74.7 175 32.0
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.2e-12 74.7 172 30.2
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.2e-12 74.7 172 30.2
Medtr6g024050 Medicago truncatula HOM05D007995 ORTHO05D001819 1.1e-11 74.3 179 33.5
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.4e-11 73.9 168 29.2
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-11 73.9 173 31.8
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-11 73.9 172 30.8
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-11 73.6 172 30.2
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-11 73.2 178 31.5
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.1e-11 72.8 172 30.8
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.1e-11 72.8 179 31.3
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.1e-11 72.4 172 29.7
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 4.1e-11 72.4 164 29.9
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 9.1e-11 71.2 158 32.3
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.0e-10 70.1 176 30.7
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-10 70.1 181 29.3
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-10 70.1 172 29.7
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-10 70.1 169 30.2
Lalb_Chr14g0366241 Lupinus albus HOM05D007995 ORTHO05D001819 2.0e-10 70.1 97 43.3
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.5e-10 68.9 169 30.2
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.9e-10 68.6 174 31.6
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.7e-10 68.2 174 29.3
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-09 67.8 161 32.3
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-09 67.0 183 30.1
Ca_28472_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.2e-09 66.6 76 51.3
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-09 66.6 172 29.7
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 2.9e-09 66.2 139 33.1
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-09 65.9 173 30.6
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-09 65.9 173 30.6
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-09 65.9 173 30.6
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-09 65.9 173 30.6
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.8e-09 65.9 173 30.6
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.8e-09 65.9 171 32.7
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 5.0e-09 65.5 139 32.4
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 5.0e-09 65.5 186 29.6
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 5.0e-09 65.5 130 32.3
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.0e-09 65.5 181 29.3
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.1e-08 64.3 139 31.7
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-08 63.9 131 32.1
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.5e-08 63.9 176 30.1
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.9e-08 63.5 179 28.5
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 1.9e-08 63.5 179 27.9
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-08 63.5 173 30.1
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-08 63.5 173 30.1
Lj1g0000753 Lotus japonicus HOM05D003146 ORTHO05D001819 2.5e-08 63.2 137 33.6
VMungo1383G0905 Vigna mungo HOM05D003146 ORTHO05D001819 2.5e-08 63.2 119 29.4
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.2e-08 62.8 181 28.7
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 4.2e-08 62.4 134 32.1
Glyma.16G055300 Glycine max HOM05D003146 ORTHO05D001819 4.2e-08 62.4 176 29.5
Medtr0155s0060 Medicago truncatula HOM05D007995 ORTHO05D001819 4.2e-08 62.4 162 32.1
Medtr4g031690 Medicago truncatula HOM05D007995 ORTHO05D001819 5.5e-08 62.0 106 39.6
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.5e-08 62.0 174 28.7
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 7.2e-08 61.6 170 27.1
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.2e-08 61.6 179 29.1
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.2e-08 61.6 131 31.3
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.4e-08 61.2 121 34.7
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.4e-08 61.2 181 28.2
MELO3C028053.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-07 60.8 129 31.8
Medtr6g024085 Medicago truncatula HOM05D007995 ORTHO05D001819 1.2e-07 60.8 184 28.3
Medtr6g024170 Medicago truncatula HOM05D007995 ORTHO05D001819 1.2e-07 60.8 184 28.3
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 6.1e-07 58.5 129 29.5
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 8.0e-07 58.2 129 29.5
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 1.4e-06 57.4 129 27.9
Ca_30975_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.3e-06 56.6 117 29.1
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 4.0e-06 55.8 129 28.7
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 4.0e-06 55.8 129 28.7
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 4.0e-06 55.8 129 28.7


User provided reference genes

Program Settings