Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 6.0e-74 280.8 146 100.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.3e-52 209.9 145 80.7
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 2.9e-52 208.8 145 77.9
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 4.2e-51 204.9 142 77.5
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 7.1e-51 204.1 173 67.1
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 1.3e-47 193.4 141 72.3
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.1e-47 192.6 145 71.7
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 6.9e-46 187.6 128 77.3
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 9.0e-46 187.2 132 73.5
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.0e-44 183.7 132 72.7
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.2e-44 182.6 136 71.3
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 4.9e-44 181.4 150 63.3
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 8.4e-44 180.6 124 75.0
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.4e-44 180.6 132 72.0
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.5e-43 179.1 129 71.3
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 3.2e-43 178.7 145 70.3
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 4.2e-43 178.3 145 69.7
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.6e-42 176.4 145 66.2
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 4.6e-42 174.9 133 66.9
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 6.0e-42 174.5 128 68.0
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 6.0e-42 174.5 127 69.3
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.0e-41 173.7 128 68.0
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.0e-41 173.7 157 59.2
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.0e-41 173.7 126 72.2
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 6.7e-41 171.0 114 73.7
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 8.7e-41 170.6 135 64.4
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 8.7e-41 170.6 131 65.6
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 8.7e-41 170.6 132 69.7
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.5e-40 169.9 137 67.2
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.9e-40 169.5 125 68.8
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.9e-40 169.5 131 67.2
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.5e-40 169.1 125 68.8
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 4.3e-40 168.3 126 65.9
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.3e-40 168.3 126 65.9
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 4.3e-40 168.3 128 66.4
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.7e-40 167.9 142 60.6
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 7.4e-40 167.5 126 69.0
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 7.4e-40 167.5 146 58.9
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 7.4e-40 167.5 133 62.4
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 9.7e-40 167.2 120 67.5
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.8e-39 165.6 126 64.3
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 2.8e-39 165.6 114 72.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 4.8e-39 164.9 146 58.2
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 8.2e-39 164.1 129 65.9
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.2e-39 164.1 113 73.5
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.8e-38 162.9 130 63.8
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 3.1e-38 162.2 121 67.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 9.0e-38 160.6 118 65.3
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.2e-37 160.2 114 70.2
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.5e-37 159.8 121 65.3
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 5.9e-37 157.9 124 66.9
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 7.7e-37 157.5 124 66.9
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 7.7e-37 157.5 124 66.9
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 7.7e-37 157.5 124 66.9
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 7.7e-37 157.5 124 66.9
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 7.7e-37 157.5 124 66.9
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 7.7e-37 157.5 111 72.1
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 7.7e-37 157.5 95 81.1
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.0e-36 157.1 119 63.0
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 1.3e-36 156.8 115 69.6
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 1.7e-36 156.4 135 61.5
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 5.0e-36 154.8 133 63.2
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 6.5e-36 154.5 169 50.9
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.4e-35 153.3 122 63.1
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.4e-35 153.3 115 67.8
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.4e-35 153.3 130 64.6
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.4e-35 153.3 101 72.3
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.5e-35 152.5 112 69.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.1e-34 149.4 114 63.2
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 2.7e-34 149.1 121 62.0
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 3.6e-34 148.7 137 56.2
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 6.1e-34 147.9 157 52.2
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.4e-33 146.7 125 59.2
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 6.7e-33 144.4 120 63.3
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 8.8e-33 144.1 114 62.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.1e-30 137.1 120 56.7
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 1.0e-28 130.6 113 59.3
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 2.2e-28 129.4 119 55.5
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 3.8e-28 128.6 104 63.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.9e-27 126.3 120 56.7
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 3.2e-27 125.6 113 59.3
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.7e-26 122.5 95 68.4
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 6.1e-26 121.3 131 51.9
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 7.9e-26 120.9 114 57.9
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 3.0e-25 119.0 99 63.6
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 3.9e-25 118.6 87 70.1
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.9e-25 118.6 91 64.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 4.8e-23 111.7 89 67.4
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 4.8e-23 111.7 109 51.4
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.8e-22 109.8 102 58.8
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 4.5e-21 105.1 120 46.7
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.0e-20 104.0 111 48.6
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.2e-20 102.8 90 57.8
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 6.5e-20 101.3 143 40.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 3.2e-19 99.0 69 58.0
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 7.2e-19 97.8 150 42.7
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 9.4e-19 97.4 115 46.1
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 5.7e-16 88.2 133 40.6
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 3.7e-15 85.5 115 44.3
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.8e-14 83.2 133 39.8
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 1.2e-13 80.5 64 64.1
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.0e-13 79.7 123 39.8
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 2.6e-13 79.3 119 44.5
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 7.2e-11 71.2 116 43.1
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 2.1e-10 69.7 113 40.7


User provided reference genes

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