Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 8.2e-24 113.2 72 100.0
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 7.6e-22 106.7 72 93.1
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 7.6e-22 106.7 72 93.1
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 7.6e-22 106.7 72 94.4
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 3.8e-21 104.4 72 93.1
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 5.0e-21 104.0 72 91.7
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 6.5e-21 103.6 72 93.1
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 1.9e-20 102.1 72 91.7
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 2.7e-19 98.2 72 87.5
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 1.1e-17 92.8 68 86.8
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 7.4e-17 90.1 68 80.9
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 2.8e-16 88.2 68 80.9
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 3.7e-16 87.8 68 80.9
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 77.9
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 83.8
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 79.4
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 80.9
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 79.4
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 1.8e-15 85.5 68 82.4
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 1.8e-15 85.5 68 82.4
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 80.9
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 4.1e-15 84.3 68 79.4
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 4.1e-15 84.3 68 79.4
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 5.3e-15 84.0 68 77.9
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 5.3e-15 84.0 117 57.3
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 6.9e-15 83.6 68 77.9
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 9.0e-15 83.2 68 77.9
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 9.0e-15 83.2 75 74.7
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 9.0e-15 83.2 75 76.0
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 9.0e-15 83.2 68 77.9
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 76.5
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 76.5
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 76.5
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 77.9
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 77.9
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 77.9
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 76.5
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 77.9
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 77.9
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 79.4
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 2.0e-14 82.0 69 71.0
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 77.9
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 2.6e-14 81.6 75 70.7
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.6e-14 81.6 68 76.5
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 2.6e-14 81.6 68 76.5
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 76.5
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 76.5
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 75.0
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 3.4e-14 81.3 68 75.0
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 76.5
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 76.5
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 75.0
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 75.0
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 4.5e-14 80.9 68 73.5
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 4.5e-14 80.9 68 75.0
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 4.5e-14 80.9 68 75.0
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 7.7e-14 80.1 68 75.0
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 7.7e-14 80.1 68 76.5
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 7.7e-14 80.1 68 75.0
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 7.7e-14 80.1 68 73.5
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 1.0e-13 79.7 68 75.0
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.0e-13 79.7 68 75.0
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 1.3e-13 79.3 68 75.0
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 1.3e-13 79.3 68 75.0
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.3e-13 79.3 68 75.0
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 1.3e-13 79.3 68 73.5
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 1.7e-13 79.0 68 69.1
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 2.2e-13 78.6 68 75.0
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 2.2e-13 78.6 68 77.9
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 2.2e-13 78.6 68 73.5
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 2.2e-13 78.6 65 76.9
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 2.2e-13 78.6 65 76.9
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 2.2e-13 78.6 68 72.1
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.2e-13 78.6 68 73.5
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.2e-13 78.6 68 73.5
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 2.9e-13 78.2 68 72.1
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 3.8e-13 77.8 69 75.4
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 3.8e-13 77.8 65 78.5
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 3.8e-13 77.8 68 76.5
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 6.5e-13 77.0 70 71.4
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 8.5e-13 76.6 64 78.1
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 1.4e-12 75.9 68 72.1
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 1.4e-12 75.9 69 71.0
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 1.4e-12 75.9 68 72.1
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 1.4e-12 75.9 68 72.1
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 1.4e-12 75.9 68 72.1
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 1.4e-12 75.9 68 73.5
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 1.4e-12 75.9 68 76.5
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 1.9e-12 75.5 64 71.9
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 1.9e-12 75.5 69 62.3
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 3.2e-12 74.7 71 70.4
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 4.2e-12 74.3 68 67.6
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 5.5e-12 73.9 69 68.1
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 5.5e-12 73.9 69 68.1
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 5.5e-12 73.9 65 72.3
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 1.2e-11 72.8 65 69.2
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 1.2e-11 72.8 68 70.6
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 1.6e-11 72.4 69 69.6
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 1.6e-11 72.4 69 69.6
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 1.6e-11 72.4 69 69.6
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 2.1e-11 72.0 68 66.2
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 2.7e-11 71.6 68 66.2
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 2.7e-11 71.6 69 65.2
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 2.7e-11 71.6 69 69.6
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 4.6e-11 70.9 42 78.6
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 4.6e-11 70.9 69 60.9
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 7.9e-11 70.1 69 72.5
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 7.9e-11 70.1 42 76.2
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 1.8e-10 68.9 42 73.8
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.9e-10 67.8 57 78.9
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 3.9e-10 67.8 61 65.6
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 5.1e-10 67.4 63 71.4
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 1.5e-09 65.9 64 57.8
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 2.0e-09 65.5 60 73.3
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 2.8e-08 61.6 42 64.3
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 6.3e-08 60.5 69 46.4
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 3.4e-06 54.7 34 76.5


User provided reference genes

Program Settings