Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 3.3e-147 525.0 262 100.0
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 5.2e-36 155.6 174 50.6
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 2.2e-34 150.2 170 48.2
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 2.2e-34 150.2 170 48.2
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 4.9e-34 149.1 90 87.8
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 1.4e-33 147.5 171 46.8
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.4e-33 146.7 165 49.7
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 4.1e-33 146.0 171 47.4
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 7.1e-33 145.2 165 49.1
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.5e-32 142.9 165 48.5
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 2.1e-29 133.7 135 49.6
Ca_07509_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 4.0e-28 129.4 130 50.8
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 2.0e-27 127.1 182 47.3
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.7e-26 122.9 142 47.2
Ca_25708_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 2.7e-24 116.7 165 43.6
Glyma.06G231400 Glycine max HOM05D008859 ORTHO05D007166 7.3e-22 108.6 140 45.0
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 1.8e-20 104.0 167 38.3
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 3.4e-19 99.8 64 84.4
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 4.4e-19 99.4 94 54.3
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 5.8e-19 99.0 163 37.4
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.4e-17 94.4 183 33.3
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 2.4e-17 93.6 159 37.7
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 3.2e-17 93.2 163 36.2
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 4.2e-17 92.8 110 43.6
Psat1g198560 Pisum sativum HOM05D008859 ORTHO05D007166 4.6e-16 89.4 105 43.8
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 9.6e-14 81.6 161 34.2
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 8.1e-13 78.6 170 31.8
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-12 77.8 110 40.0
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.8e-12 77.4 97 46.4
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-12 77.4 104 37.5
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-12 76.3 108 38.0
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-12 75.9 109 38.5
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 9.0e-12 75.1 110 38.2
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 1.2e-11 74.7 146 33.6
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-11 74.7 109 39.4
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-11 73.9 120 38.3
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-11 73.2 98 39.8
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-11 73.2 122 36.9
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 3.4e-11 73.2 143 36.4
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 4.4e-11 72.8 110 37.3
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 4.4e-11 72.8 104 36.5
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 4.4e-11 72.8 109 37.6
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 9.9e-11 71.6 91 40.7
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 1.3e-10 71.2 128 32.8
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-10 71.2 108 37.0
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 1.3e-10 71.2 92 40.2
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-10 70.9 95 40.0
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-10 70.9 111 35.1
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 2.2e-10 70.5 64 48.4
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-10 70.1 106 36.8
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-10 70.1 108 37.0
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-10 70.1 101 37.6
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 4.9e-10 69.3 109 35.8
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.9e-10 69.3 117 34.2
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 8.4e-10 68.6 122 33.6
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 8.4e-10 68.6 91 40.7
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-09 68.2 101 36.6
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.1e-09 68.2 105 35.2
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 1.4e-09 67.8 115 34.8
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-09 67.0 98 37.8
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-09 66.6 114 34.2
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.2e-09 66.6 162 31.5
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 4.2e-09 66.2 93 39.8
Psat1g076560 Pisum sativum HOM05D009811 ORTHO05D007166 7.1e-09 65.5 100 43.0
Phvul.004G091794 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.2e-08 64.7 104 41.3
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-08 64.7 60 50.0
Medtr7g037380 Medicago truncatula HOM05D001266 ORTHO05D001105 1.6e-08 64.3 75 50.7
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.7e-08 63.5 90 35.6
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 3.5e-08 63.2 65 43.1
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 3.5e-08 63.2 78 41.0
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 4.6e-08 62.8 75 40.0
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 4.6e-08 62.8 91 37.4
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 7.8e-08 62.0 106 34.9
Lalb_Chr02g0153941 Lupinus albus HOM05D008859 ORTHO05D007166 1.3e-07 61.2 50 56.0
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.3e-07 61.2 123 32.5
Medtr2g077010 Medicago truncatula HOM05D008859 ORTHO05D007166 3.0e-07 60.1 73 45.2
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 5.1e-07 59.3 106 34.9
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 5.1e-07 59.3 134 33.6
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 6.6e-07 58.9 62 38.7
Medtr6g088780 Medicago truncatula HOM05D008859 ORTHO05D007166 1.1e-06 58.2 136 30.9
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.5e-06 57.8 66 40.9
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 4.3e-06 56.2 61 42.6
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 9.6e-06 55.1 145 28.3
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 9.6e-06 55.1 52 53.8


User provided reference genes

Program Settings