Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 5.0e-305 1050.4 587 100.0
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 6.8e-177 624.8 619 62.5
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.3e-175 620.5 616 62.0
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 5.8e-168 595.1 633 60.0
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 5.5e-134 482.3 582 55.3
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 2.3e-132 476.9 513 58.7
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.7e-127 460.7 563 57.7
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 7.7e-112 408.7 593 57.2
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 3.7e-98 363.2 599 52.3
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.4e-73 281.6 632 41.0
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 2.3e-68 264.2 618 39.3
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 4.1e-65 253.4 567 40.7
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 4.0e-60 236.9 632 37.2
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.6e-56 224.9 472 44.1
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.2e-53 215.3 570 35.1
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 3.6e-53 213.8 499 39.3
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 8.1e-53 212.6 617 34.8
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 5.2e-52 209.9 578 35.6
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.5e-51 208.4 591 36.7
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 2.6e-51 207.6 588 35.7
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 3.4e-51 207.2 527 36.1
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 5.4e-49 199.9 567 35.4
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 3.9e-47 193.7 586 34.3
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.5e-46 191.8 606 35.8
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 7.3e-46 189.5 606 35.6
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 8.1e-45 186.0 319 45.1
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.1e-44 185.7 650 33.7
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.5e-43 181.8 601 34.9
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 5.8e-43 179.9 626 34.5
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 2.2e-42 177.9 522 34.3
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.4e-42 176.0 613 33.4
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.4e-41 174.5 293 45.4
Psat1g013640 Pisum sativum HOM05D006718 ORTHO05D008492 1.3e-39 168.7 597 37.0
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 8.6e-39 166.0 393 36.1
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 1.1e-38 165.6 618 32.2
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 4.3e-38 163.7 417 36.5
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 9.6e-38 162.5 560 31.8
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 9.6e-38 162.5 573 31.6
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 9.6e-38 162.5 633 34.3
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 4.7e-37 160.2 417 34.1
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 2.4e-36 157.9 446 33.9
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 5.2e-36 156.8 594 33.8
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 6.9e-36 156.4 420 34.8
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 3.4e-35 154.1 675 29.8
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 4.4e-35 153.7 241 47.7
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 4.4e-35 153.7 517 33.8
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.9e-34 151.0 245 43.7
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 6.4e-34 149.8 279 41.9
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.4e-33 148.7 553 32.4
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.4e-33 148.7 439 32.1
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 3.2e-33 147.5 273 40.3
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 3.2e-33 147.5 280 41.8
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 3.2e-33 147.5 578 32.2
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 4.2e-33 147.1 272 43.4
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 5.4e-33 146.7 519 31.6
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.2e-32 145.6 630 33.0
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 1.2e-32 145.6 275 41.1
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 1.6e-32 145.2 603 32.0
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 2.1e-32 144.8 377 35.3
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.1e-32 144.8 421 34.4
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 2.7e-32 144.4 623 31.3
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 6.0e-32 143.3 641 30.7
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.0e-31 142.5 227 44.5
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.0e-31 142.5 365 38.9
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 2.3e-31 141.4 227 43.2
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 2.3e-31 141.4 667 30.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 3.0e-31 141.0 276 39.5
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 3.0e-31 141.0 337 37.7
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 3.0e-31 141.0 290 42.4
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.1e-30 139.0 254 42.5
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.1e-30 139.0 614 31.6
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.1e-30 139.0 264 39.8
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.9e-30 138.3 253 39.5
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.3e-29 135.6 561 31.2
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.6e-29 135.2 416 32.9
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 4.8e-29 133.7 611 31.1
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.8e-29 133.7 204 46.1
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 4.8e-29 133.7 491 33.8
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 6.2e-29 133.3 626 34.3
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 8.1e-29 132.9 234 41.9
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 8.1e-29 132.9 331 36.3
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.8e-28 131.7 551 31.2
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 9.0e-28 129.4 207 46.9
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.2e-27 129.0 334 36.2
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.0e-27 128.3 261 37.9
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.6e-27 127.9 653 30.0
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 9.9e-27 125.9 244 39.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.3e-26 125.6 475 30.5
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.7e-26 125.2 341 37.5
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 4.9e-26 123.6 680 29.9
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 6.4e-26 123.2 298 36.9
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 2.4e-25 121.3 239 37.7
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 3.2e-25 120.9 233 40.3
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.5e-24 117.5 635 28.8
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 6.0e-24 116.7 597 30.3
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 7.9e-24 116.3 317 38.2
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 1.3e-23 115.5 235 37.0
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 5.1e-23 113.6 636 28.6
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.1e-21 108.2 236 39.4
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 2.8e-21 107.8 635 29.1
Psat2g067120 Pisum sativum HOM05D006718 ORTHO05D008492 1.6e-16 92.0 106 51.9
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 2.3e-15 88.2 372 31.7
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 9.6e-14 82.8 561 27.8
Psat0s1639g0200 Pisum sativum HOM05D006718 ORTHO05D008492 1.5e-11 75.5 75 56.0
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 3.3e-06 57.8 113 38.1
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 9.7e-06 56.2 293 25.6


User provided reference genes

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