Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 1.1e-259 899.4 459 100.0
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 5.7e-139 498.4 459 62.3
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 3.7e-138 495.7 465 60.6
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 3.7e-138 495.7 465 60.6
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 7.0e-137 491.5 474 59.3
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 5.8e-131 471.9 492 56.9
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 2.2e-130 469.9 449 59.5
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 2.2e-130 469.9 449 59.7
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 1.4e-124 450.7 463 55.5
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 3.5e-104 382.9 486 48.6
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 3.9e-103 379.4 454 50.2
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 5.1e-103 379.0 459 51.0
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 7.3e-102 375.2 450 48.9
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 3.1e-100 369.8 479 49.9
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 9.0e-100 368.2 479 49.7
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 2.6e-99 366.7 458 48.5
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 3.8e-98 362.8 462 46.8
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 3.8e-98 362.8 454 48.5
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 1.9e-97 360.5 435 48.5
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 5.4e-97 359.0 440 48.2
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 1.6e-96 357.5 450 49.8
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.1e-96 357.1 480 47.5
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 2.7e-96 356.7 475 46.9
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 1.0e-95 354.8 455 48.4
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 2.3e-95 353.6 477 47.0
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 6.7e-95 352.1 458 48.7
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 6.7e-95 352.1 462 48.1
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 1.5e-94 350.9 459 48.4
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 3.3e-94 349.7 459 49.2
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.5e-91 340.9 483 47.0
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 9.9e-91 338.2 435 48.7
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 2.2e-90 337.0 455 46.4
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 2.9e-90 336.7 458 48.0
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 2.9e-90 336.7 456 47.8
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 6.4e-90 335.5 439 48.1
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 1.1e-89 334.7 467 46.9
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 4.2e-89 332.8 486 46.5
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 7.1e-89 332.0 439 47.8
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 9.3e-89 331.6 419 47.7
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 2.7e-88 330.1 494 45.5
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 2.5e-86 323.6 451 46.3
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 4.3e-86 322.8 456 47.6
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 2.4e-84 317.0 449 46.5
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 4.0e-84 316.2 456 46.5
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 2.6e-83 313.5 437 45.1
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 3.8e-82 309.7 469 45.0
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 7.9e-80 302.0 497 42.1
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 3.9e-79 299.7 466 45.1
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 1.1e-78 298.1 466 42.7
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 1.9e-78 297.4 478 42.3
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 2.5e-78 297.0 469 44.8
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 5.7e-78 295.8 417 45.3
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 4.1e-76 289.7 475 40.8
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 3.4e-75 286.6 540 39.1
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 2.9e-74 283.5 426 45.1
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 3.8e-74 283.1 457 41.8
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 1.6e-72 277.7 503 39.2
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.0e-71 275.0 501 40.1
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.8e-71 274.2 495 40.0
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 1.9e-70 270.8 463 40.0
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 9.7e-70 268.5 468 40.4
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 2.8e-69 266.9 456 41.0
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 7.7e-67 258.8 472 38.8
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 2.2e-66 257.3 495 38.2
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 6.5e-66 255.8 481 39.3
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 1.1e-65 255.0 447 40.3
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 1.2e-64 251.5 455 42.9
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 1.6e-64 251.1 449 40.1
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 6.1e-64 249.2 468 40.2
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 1.5e-62 244.6 514 37.2
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 4.4e-62 243.0 417 41.0
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 8.2e-61 238.8 453 39.7
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 1.4e-60 238.0 492 35.8
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 1.8e-60 237.7 453 39.5
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 2.4e-60 237.3 473 35.3
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 6.9e-60 235.7 461 38.4
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 4.5e-59 233.0 439 38.0
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 1.0e-58 231.9 494 35.6
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 2.2e-58 230.7 498 35.1
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 2.2e-58 230.7 472 36.9
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 5.0e-58 229.6 531 35.4
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.5e-57 227.3 451 37.7
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 4.2e-57 226.5 455 36.9
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 5.5e-57 226.1 458 37.3
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 7.2e-57 225.7 460 36.1
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.2e-56 224.9 443 37.5
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.6e-56 223.4 453 38.6
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 6.1e-56 222.6 488 37.3
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 6.7e-55 219.2 459 37.3
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 8.8e-55 218.8 467 35.8
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.5e-54 218.0 446 36.3
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 1.5e-54 218.0 531 35.8
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 7.4e-54 215.7 452 35.6
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 7.4e-54 215.7 452 35.6
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 7.4e-54 215.7 452 35.6
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.3e-53 214.9 470 37.2
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 2.2e-53 214.2 384 39.3
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 2.8e-53 213.8 457 36.3
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 4.1e-52 209.9 459 35.7
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 1.3e-50 204.9 467 35.3
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 3.0e-47 193.7 472 34.7
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.1e-44 185.3 457 35.2
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 1.6e-43 181.4 237 47.7
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 5.5e-41 172.9 226 46.0
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 1.0e-39 168.7 250 43.2
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 4.4e-38 163.3 471 32.5
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 5.9e-35 152.9 388 32.0
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 2.4e-28 131.0 483 27.5
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 1.2e-22 112.1 347 30.8
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 2.5e-17 94.4 219 34.2
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 5.8e-14 83.2 125 41.6
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 9.8e-14 82.4 154 37.0
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 2.3e-10 71.2 141 36.9
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 3.1e-07 60.8 83 41.0
ECA234G0697 Erigeron canadensis HOM05D006741 ORTHO05D008434 3.4e-06 57.4 113 34.5
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 9.9e-06 55.8 127 33.9


User provided reference genes

Program Settings