Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.1e-309 1065.8 557 100.0
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.7e-129 467.2 583 53.3
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.1e-123 448.0 580 51.4
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 1.4e-110 404.4 571 48.7
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 4.9e-100 369.4 574 44.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.0e-97 360.1 523 47.6
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 9.9e-93 345.1 578 43.8
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 1.1e-88 331.6 574 42.0
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.2e-85 321.6 568 43.0
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.9e-80 304.3 562 41.8
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.1e-43 182.2 575 32.5
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.5e-43 181.0 362 40.3
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 5.5e-43 179.9 560 31.4
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 7.9e-42 176.0 563 32.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 3.0e-41 174.1 565 29.9
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 3.9e-41 173.7 576 31.6
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 5.1e-41 173.3 566 30.9
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 4.4e-40 170.2 575 30.6
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 3.7e-39 167.2 539 33.4
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 2.9e-36 157.5 294 40.5
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 8.5e-36 156.0 331 37.5
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.4e-35 155.2 342 38.9
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.4e-35 155.2 344 37.2
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.2e-35 154.1 559 30.8
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 2.1e-34 151.4 342 38.0
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 7.9e-34 149.4 376 35.1
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 1.0e-33 149.1 417 34.8
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.4e-33 148.7 425 31.8
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 8.8e-33 146.0 383 32.4
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.1e-32 145.6 304 38.8
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.4e-32 143.7 405 35.6
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 1.7e-31 141.7 317 37.5
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.4e-30 137.9 409 34.5
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.4e-30 137.9 409 34.5
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 5.3e-30 136.7 305 36.1
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.1e-30 136.0 412 34.0
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 4.5e-29 133.7 426 34.0
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 4.5e-29 133.7 559 27.5
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 1.0e-28 132.5 566 27.2
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.0e-28 132.5 428 33.4
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 2.9e-28 131.0 490 31.0
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 3.2e-27 127.5 361 34.3
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 3.2e-27 127.5 309 37.2
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 4.7e-26 123.6 288 37.2
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 4.7e-26 123.6 291 36.4
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.2e-24 119.0 336 33.3
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 5.7e-24 116.7 220 37.3
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 9.7e-24 115.9 298 33.2
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.3e-23 115.5 410 32.0
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.1e-22 112.5 390 33.1
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 5.3e-22 110.2 477 28.7
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 7.0e-22 109.8 126 50.0
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.1e-19 102.4 403 30.8
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 1.9e-19 101.7 569 26.5
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 4.2e-19 100.5 312 33.7
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 7.2e-19 99.8 435 31.0
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.6e-18 98.6 389 29.8
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.6e-18 98.6 286 32.9
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 3.6e-18 97.4 406 29.8
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 4.7e-18 97.1 443 28.7
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 8.0e-18 96.3 290 34.1
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 1.0e-17 95.9 317 33.1
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.3e-17 94.7 382 30.6
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 5.2e-17 93.6 581 27.2
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 5.7e-16 90.1 455 29.9
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 4.8e-15 87.0 328 29.9
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 6.3e-15 86.7 370 29.2
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 2.4e-14 84.7 382 28.5
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 5.4e-14 83.6 317 28.1
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.3e-12 79.0 97 44.3
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.7e-12 78.6 285 33.3
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.5e-11 75.5 155 38.1
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 7.2e-11 73.2 104 38.5
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 1.2e-10 72.4 288 31.2


User provided reference genes

Program Settings