Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 6.4e-235 817.0 401 100.0
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 8.7e-208 726.9 400 88.8
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.9e-207 725.7 401 88.0
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 3.4e-204 714.9 403 88.6
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 6.0e-201 704.1 402 86.1
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.0e-200 703.4 400 85.8
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 6.5e-195 684.1 402 84.8
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.4e-189 666.4 379 86.5
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.3e-187 659.8 378 84.1
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 5.0e-187 657.9 376 87.0
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 8.4e-187 657.1 407 79.4
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.1e-186 656.8 399 79.2
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 7.2e-186 654.1 401 79.8
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.2e-185 653.3 403 80.4
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.6e-185 652.9 378 84.1
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 1.0e-184 650.2 401 79.8
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 8.7e-184 647.1 378 82.8
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 1.8e-181 639.4 400 78.8
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.4e-181 639.0 400 77.5
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 5.3e-181 637.9 400 78.8
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 9.0e-181 637.1 383 81.2
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.5e-180 636.3 401 78.6
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 5.9e-180 634.4 401 78.8
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 7.7e-180 634.0 400 78.2
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 3.8e-179 631.7 405 78.0
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 2.5e-178 629.0 360 85.3
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 3.2e-178 628.6 348 86.2
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 1.6e-177 626.3 394 78.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 4.6e-177 624.8 379 81.0
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 4.6e-177 624.8 382 80.9
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 1.0e-176 623.6 423 74.2
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.8e-176 622.9 400 76.8
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.8e-176 622.9 327 91.7
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 8.8e-176 620.5 378 79.4
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.0e-175 619.4 400 76.0
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 3.3e-175 618.6 400 76.0
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 7.4e-175 617.5 364 82.7
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.7e-174 616.3 382 79.8
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 8.2e-174 614.0 400 76.0
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 2.4e-173 612.5 347 84.4
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 5.3e-173 611.3 404 76.2
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.2e-172 610.1 465 69.0
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 2.6e-172 609.0 347 83.9
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.6e-172 609.0 377 78.0
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.3e-171 606.7 382 76.4
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 6.5e-171 604.4 400 75.0
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 8.5e-171 604.0 381 78.7
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 8.5e-171 604.0 376 78.2
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.1e-170 603.6 361 80.6
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.4e-170 603.2 408 74.5
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.9e-170 602.8 362 79.8
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.9e-170 602.8 359 81.3
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 2.5e-170 602.4 361 80.3
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 2.5e-170 602.4 372 79.3
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 5.5e-170 601.3 361 81.7
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 9.4e-170 600.5 371 80.9
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.6e-169 599.7 381 78.0
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 2.7e-169 599.0 404 75.0
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 3.6e-169 598.6 349 81.9
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 4.7e-169 598.2 371 80.6
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.1e-169 597.8 356 81.5
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 6.1e-169 597.8 358 80.2
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 7.9e-169 597.4 347 81.8
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.0e-168 597.0 400 72.5
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.0e-168 597.0 362 80.1
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.4e-168 596.7 382 76.4
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.8e-168 596.3 383 77.5
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.8e-168 596.3 344 84.6
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 2.3e-168 595.9 347 81.6
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 2.3e-168 595.9 357 81.5
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 3.0e-168 595.5 362 79.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 6.7e-168 594.3 381 78.0
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.8e-168 594.0 330 86.1
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.1e-167 593.6 373 78.6
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 2.0e-167 592.8 348 81.3
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 2.6e-167 592.4 350 82.3
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 2.6e-167 592.4 332 84.6
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 2.6e-167 592.4 358 79.6
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.3e-166 590.1 356 79.5
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.2e-166 589.3 402 73.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.2e-166 589.3 397 72.8
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 2.8e-166 589.0 347 81.0
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 6.3e-166 587.8 319 87.8
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 8.2e-166 587.4 347 79.8
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.8e-165 586.3 373 75.6
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.8e-165 586.3 332 83.1
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.1e-165 585.1 402 72.4
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.2e-164 583.6 400 71.5
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 5.9e-164 581.3 405 73.3
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 8.5e-163 577.4 354 77.4
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 7.2e-162 574.3 364 75.5
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.6e-161 573.2 400 69.0
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 6.1e-161 571.2 347 78.7
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 6.7e-160 567.8 357 75.6
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 9.7e-159 563.9 365 74.2
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 3.8e-155 552.0 347 75.8
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.1e-154 550.4 338 79.0
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.5e-154 550.1 338 79.0
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.0e-148 529.6 395 68.6
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.7e-148 529.3 378 71.2
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.6e-143 512.7 357 69.5
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.8e-141 506.5 346 69.7
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.6e-140 503.4 344 73.5
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.6e-140 503.4 330 70.6
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 7.7e-140 501.1 358 69.3
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.1e-137 493.0 400 63.5
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 2.8e-137 492.7 357 66.7
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 3.3e-130 469.2 289 81.3
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.7e-129 465.3 400 61.8
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.6e-121 440.3 288 76.4
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 5.8e-119 431.8 329 61.1
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 2.1e-116 423.3 269 77.7
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 8.6e-115 417.9 376 56.9
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.5e-111 407.1 287 71.8
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 4.9e-110 402.1 286 69.9
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 4.1e-109 399.1 338 56.2
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.9e-101 373.6 327 56.6
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 7.3e-98 361.7 369 49.9
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 5.3e-72 275.8 287 47.7
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 8.7e-67 258.5 192 67.2
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.3e-65 254.6 210 63.8
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 3.6e-60 236.5 178 65.2
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 2.6e-47 193.7 170 60.6
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.0e-46 191.8 131 71.8
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 7.8e-15 85.9 162 40.1
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 3.9e-14 83.6 90 51.1
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 3.9e-14 83.6 90 51.1
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 9.8e-10 68.9 35 85.7


User provided reference genes

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