Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 6.2e-140 500.7 244 100.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.3e-110 403.3 245 81.6
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.4e-107 393.3 250 78.4
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.0e-102 377.1 241 76.8
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 3.3e-101 372.1 243 76.5
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 5.8e-98 361.3 235 76.6
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 5.8e-98 361.3 235 76.6
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 3.4e-82 308.9 245 64.9
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.4e-78 297.0 240 61.2
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.9e-78 295.4 237 64.6
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 5.7e-77 291.6 240 62.9
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.3e-76 290.4 243 59.7
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 1.1e-75 287.3 187 78.6
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 1.4e-75 287.0 240 58.8
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 4.1e-75 285.4 241 57.7
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 5.3e-75 285.0 255 62.4
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 5.3e-75 285.0 247 59.9
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 5.3e-75 285.0 245 59.6
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.2e-74 283.9 245 58.0
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 2.0e-74 283.1 241 58.5
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 5.9e-74 281.6 246 58.1
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 1.3e-73 280.4 225 60.9
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.7e-73 280.0 241 59.3
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 2.9e-73 279.3 243 60.9
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 3.8e-73 278.9 244 58.2
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 6.5e-73 278.1 235 61.3
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.9e-72 276.6 240 58.3
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.5e-72 276.2 240 57.5
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 7.2e-72 274.6 244 61.1
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 9.4e-72 274.2 239 56.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.6e-71 273.5 240 57.1
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 2.1e-71 273.1 240 58.3
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.7e-71 271.9 241 58.5
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 6.1e-71 271.6 221 60.6
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 7.9e-71 271.2 221 60.6
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.0e-70 270.8 230 57.8
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 2.3e-70 269.6 208 63.5
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 6.7e-70 268.1 237 57.4
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.5e-69 266.9 248 58.1
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 5.7e-69 265.0 247 57.1
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 5.7e-69 265.0 208 63.0
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 7.4e-69 264.6 221 59.3
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.7e-68 263.5 160 81.9
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.2e-68 263.1 244 54.5
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 6.3e-68 261.5 248 54.8
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.1e-67 259.2 218 58.7
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 9.1e-67 257.7 242 55.4
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.2e-66 257.3 241 56.0
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.5e-66 256.9 221 57.0
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.0e-66 256.5 244 54.9
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.0e-66 256.5 245 56.7
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 3.4e-66 255.8 224 57.1
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 4.5e-66 255.4 241 54.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-65 253.8 224 59.8
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 5.0e-65 251.9 241 52.3
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.5e-65 251.1 243 51.9
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.5e-64 249.6 161 82.6
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 3.2e-64 249.2 220 59.5
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 3.2e-64 249.2 238 58.4
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 5.5e-64 248.4 252 52.8
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 5.5e-64 248.4 222 59.5
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.1e-63 246.5 246 54.1
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 2.7e-63 246.1 241 51.9
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 4.7e-63 245.4 241 55.6
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 6.1e-63 245.0 220 55.9
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 2.3e-62 243.0 220 58.2
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 5.2e-62 241.9 242 56.6
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 5.2e-62 241.9 220 57.7
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 5.2e-62 241.9 222 59.0
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 6.7e-62 241.5 221 57.5
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.5e-61 240.4 222 59.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 4.4e-61 238.8 240 56.7
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 7.4e-61 238.0 283 48.1
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 9.7e-61 237.7 188 61.2
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.3e-60 237.3 182 62.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 6.3e-60 235.0 244 54.1
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 8.2e-60 234.6 282 47.9
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.1e-59 234.2 218 55.5
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.4e-59 233.8 197 61.4
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.8e-59 233.4 241 56.0
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.8e-59 233.4 223 54.7
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 7.0e-59 231.5 194 59.3
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 6.5e-57 224.9 242 51.2
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.4e-54 217.2 229 50.2
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 8.8e-54 214.5 244 49.2
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.5e-53 213.8 210 55.7
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 2.0e-53 213.4 240 50.4
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 2.2e-52 209.9 176 61.4
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 1.1e-51 207.6 244 45.1
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.5e-48 197.2 181 60.2
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.6e-47 193.7 236 46.2
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 2.1e-47 193.4 237 46.8
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 1.8e-46 190.3 184 53.8
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 3.0e-46 189.5 154 59.7
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 3.4e-45 186.0 204 49.5
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.1e-43 179.5 173 56.6
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.2e-42 177.6 209 48.3
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-42 177.6 198 49.5
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.8e-39 166.4 148 56.8
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.0e-38 164.5 215 44.2
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 7.5e-37 158.3 175 46.9
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.5e-37 158.3 140 57.9
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 7.0e-35 151.8 187 43.3
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 4.7e-31 139.0 115 57.4
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 4.6e-26 122.5 86 66.3
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.0e-25 121.3 155 47.7
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.2e-21 107.8 150 40.0
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.9e-20 103.2 73 68.5
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.4e-19 100.1 64 70.3
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.5e-18 96.3 60 68.3
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 1.5e-16 90.9 184 32.6
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.0e-14 82.8 186 34.4
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.2e-14 82.4 70 60.0
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.9e-08 63.9 154 29.2
Cre03.g180500 Chlamydomonas reinhardtii HOM05D006411 ORTHO05D007563 3.3e-08 63.2 172 25.0
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 4.3e-08 62.8 79 46.8
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 5.6e-08 62.4 39 64.1
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.6e-07 60.8 40 60.0
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.8e-07 60.1 38 63.2
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.1e-07 58.5 59 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 8.9e-06 55.1 69 42.0


User provided reference genes

Program Settings