Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 7.3e-167 590.5 302 100.0
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 1.6e-150 536.2 302 90.4
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 9.0e-149 530.4 286 90.2
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 9.3e-146 520.4 306 87.3
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 4.6e-145 518.1 302 86.1
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.1e-143 513.5 307 86.3
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.3e-142 510.0 302 84.1
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 2.8e-142 508.8 303 86.8
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 3.4e-140 501.9 280 88.2
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 5.8e-140 501.1 310 83.2
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 7.6e-140 500.7 282 86.5
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.7e-139 499.6 281 87.5
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 4.9e-139 498.0 281 87.5
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 1.1e-138 496.9 302 81.5
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.9e-138 496.1 302 82.1
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.9e-138 496.1 297 83.8
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 2.5e-138 495.7 286 83.9
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 2.5e-138 495.7 302 81.5
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 3.2e-138 495.4 302 81.1
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.2e-138 495.4 303 84.5
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 4.2e-138 495.0 283 84.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 4.2e-138 495.0 283 84.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 4.2e-138 495.0 283 84.5
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 4.2e-138 495.0 290 85.2
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 7.1e-138 494.2 300 81.7
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.2e-137 493.4 280 84.6
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 2.1e-137 492.7 280 85.0
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 2.1e-137 492.7 302 79.8
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.1e-137 492.7 280 85.7
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.1e-137 492.7 282 86.9
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 2.7e-137 492.3 288 85.8
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 2.7e-137 492.3 295 84.4
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.7e-137 492.3 280 86.1
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 6.0e-137 491.1 302 81.1
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 7.9e-137 490.7 280 85.7
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 1.0e-136 490.3 302 80.8
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 1.3e-136 490.0 286 82.5
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 1.3e-136 490.0 295 82.4
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 1.3e-136 490.0 280 86.4
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.8e-136 489.6 302 80.5
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.8e-136 489.6 303 81.5
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.3e-136 489.2 285 84.2
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 3.0e-136 488.8 302 80.1
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 5.1e-136 488.0 282 84.8
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.7e-136 487.6 280 85.0
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.1e-135 486.9 290 83.1
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 1.5e-135 486.5 281 85.1
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.5e-135 486.5 304 81.2
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.9e-135 486.1 302 82.5
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.9e-135 486.1 278 85.3
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.9e-135 486.1 302 80.5
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.5e-135 485.7 304 80.9
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.5e-135 485.7 281 85.1
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 2.5e-135 485.7 280 85.0
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.3e-135 485.3 280 84.6
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.7e-135 484.6 283 83.0
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 7.4e-135 484.2 302 82.5
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 9.6e-135 483.8 280 84.6
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.3e-134 483.4 297 81.5
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.1e-134 482.6 278 84.9
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.8e-134 482.3 290 81.4
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.7e-134 481.9 302 80.1
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.7e-134 481.9 283 83.4
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 3.7e-134 481.9 281 84.7
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 4.8e-134 481.5 296 81.1
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 4.8e-134 481.5 305 80.0
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 8.2e-134 480.7 288 82.6
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.1e-133 480.3 274 84.3
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.8e-133 479.6 279 83.9
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 2.4e-133 479.2 302 83.1
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 3.1e-133 478.8 303 80.5
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 4.1e-133 478.4 280 83.9
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.9e-133 477.6 280 84.3
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.2e-132 476.9 302 79.1
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.5e-132 476.5 304 79.3
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 2.0e-132 476.1 288 82.6
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 3.4e-132 475.3 285 82.8
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 4.5e-132 474.9 314 78.0
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 5.8e-132 474.6 302 80.1
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 7.6e-132 474.2 299 80.9
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.3e-131 473.4 273 85.7
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 1.7e-131 473.0 282 82.6
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 2.2e-131 472.6 280 83.9
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 2.9e-131 472.2 302 79.1
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 2.9e-131 472.2 288 81.9
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 5.0e-131 471.5 280 82.9
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 8.4e-131 470.7 304 77.6
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 2.5e-130 469.2 310 79.4
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.2e-130 468.4 279 83.2
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 2.7e-129 465.7 280 82.5
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 4.6e-129 464.9 304 77.6
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.0e-128 463.8 304 78.0
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.3e-128 463.4 280 81.1
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.3e-128 462.6 292 79.1
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 3.9e-128 461.8 300 79.3
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 6.7e-128 461.1 280 82.1
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.9e-127 459.5 265 86.0
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 1.9e-127 459.5 290 78.3
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 2.5e-127 459.1 280 82.5
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 2.5e-127 459.1 278 81.7
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 4.3e-127 458.4 282 80.5
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 5.7e-127 458.0 300 77.3
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.6e-126 456.4 281 80.1
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.6e-126 456.4 278 80.9
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 2.2e-126 456.1 297 78.5
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 6.9e-125 451.1 315 75.2
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 3.4e-124 448.7 277 80.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 5.9e-124 448.0 300 76.3
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 7.7e-124 447.6 302 74.8
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 2.9e-123 445.7 281 79.7
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 3.8e-123 445.3 293 75.4
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 5.0e-123 444.9 280 81.4
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.7e-121 439.1 290 77.2
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.0e-120 437.2 309 74.1
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.8e-120 436.4 282 77.0
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.5e-119 433.3 281 76.5
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 5.7e-119 431.4 384 63.5
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.4e-117 426.8 294 72.4
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 3.1e-117 425.6 276 76.1
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.3e-117 424.9 270 79.6
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.5e-116 423.3 285 76.5
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.5e-116 421.8 270 78.5
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 1.2e-113 413.7 263 80.2
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.6e-113 413.3 280 75.4
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.1e-111 407.1 218 91.3
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.1e-111 407.1 218 91.3
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 7.4e-111 404.4 221 90.0
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 6.3e-110 401.4 267 76.0
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 3.1e-109 399.1 221 88.2
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.8e-107 392.1 273 68.5
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 3.2e-106 389.0 250 75.2
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 1.0e-104 384.0 251 75.3
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 2.8e-102 375.9 272 66.9
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 3.5e-100 369.0 200 89.5
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 2.2e-99 366.3 221 80.1
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 9.4e-98 360.9 253 68.4
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.7e-97 358.6 305 64.3
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.6e-92 343.6 215 80.9
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 1.9e-90 336.7 182 90.1
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 4.0e-88 328.9 182 90.7
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 4.9e-86 322.0 208 78.8
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 1.5e-79 300.4 174 86.8
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 7.0e-77 291.6 191 75.9
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.6e-76 290.4 152 95.4
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.0e-75 287.7 221 72.4
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.8e-64 250.4 194 66.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.2e-60 237.7 146 81.5
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 6.2e-57 225.3 209 60.8
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.3e-46 191.0 231 46.3
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 8.4e-46 188.3 158 63.9
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 4.2e-45 186.0 136 72.1
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 5.4e-45 185.7 119 72.3
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 4.8e-41 172.6 177 57.6
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 7.6e-39 165.2 105 74.3
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 1.3e-35 154.5 86 82.6
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.3e-33 147.9 196 49.5
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.6e-33 147.5 95 73.7
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 2.9e-30 136.7 306 33.3
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 8.4e-30 135.2 84 77.4
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.3e-29 131.7 88 72.7
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 3.3e-26 123.2 170 43.5
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 6.9e-24 115.5 65 86.2
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 6.9e-24 115.5 65 86.2
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.5e-21 107.1 87 73.6
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.5e-21 107.1 87 73.6
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 4.1e-16 89.7 158 39.9
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 5.3e-16 89.4 53 77.4
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-15 85.9 85 54.1
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 3.2e-13 80.1 79 53.2
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 3.5e-12 76.6 92 47.8
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.0e-11 75.1 63 57.1
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 5.1e-11 72.8 59 62.7
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.9e-10 70.9 59 57.6
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 2.5e-10 70.5 103 41.7
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 6.9e-08 62.4 32 87.5
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 9.0e-08 62.0 43 74.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 5.9e-07 59.3 42 73.8
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 7.7e-07 58.9 57 49.1
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.3e-06 58.2 38 76.3
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.9e-06 57.0 32 81.2


User provided reference genes

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