Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P9T7 Lonicera japonica HOM05D000012 ORTHO05D022856 6.9e-47 190.3 94 100.0
Lj3P27T3 Lonicera japonica HOM05D000012 ORTHO05D022856 2.5e-41 171.8 88 96.6
Lj2A78G30 Lonicera japonica HOM05D000012 ORTHO05D003972 1.3e-24 116.3 90 63.3
Lju361C15G0 Lonicera japonica HOM05D000012 ORTHO05D003972 9.0e-23 110.2 87 59.8
Oeu030521.1 Olea europaea HOM05D000012 ORTHO05D003972 1.5e-22 109.4 89 60.7
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 3.4e-22 108.2 86 65.1
QL07p035978 Quercus lobata HOM05D000012 ORTHO05D003972 2.1e-19 99.0 77 61.0
Cc11_g10430 Coffea canephora HOM05D000012 ORTHO05D003972 4.6e-19 97.8 74 63.5
Actinidia01105 Actinidia chinensis HOM05D000012 ORTHO05D017217 1.0e-18 96.7 80 56.2
QL07p035973 Quercus lobata HOM05D000012 ORTHO05D003972 1.0e-18 96.7 88 53.4
Oeu030518.1 Olea europaea HOM05D000012 ORTHO05D003972 1.3e-18 96.3 87 54.0
SalBow5G4197 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.3e-18 95.5 90 51.1
SalBow5G5134 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.3e-18 95.5 90 51.1
Prupe.6G272600 Prunus persica HOM05D000012 ORTHO05D003972 3.0e-18 95.1 88 51.1
Cc11_g06880 Coffea canephora HOM05D000012 ORTHO05D003972 1.5e-17 92.8 85 56.5
Lj3A127T4 Lonicera japonica HOM05D000012 ORTHO05D003972 2.5e-17 92.0 69 63.8
QL07p035993 Quercus lobata HOM05D000012 ORTHO05D003972 5.7e-17 90.9 76 59.2
Cc11_g06890 Coffea canephora HOM05D000012 ORTHO05D003972 7.4e-17 90.5 70 61.4
Atru.chr8.2213 Acer truncatum HOM05D000012 ORTHO05D003972 9.7e-17 90.1 86 50.0
SalBow5G4030 Salvia bowleyana HOM05D000012 ORTHO05D003972 1.6e-16 89.4 85 51.8
TAR623G0683 Trochodendron aralioides HOM05D000012 ORTHO05D003972 1.6e-16 89.4 74 56.8
Lj3C108T1 Lonicera japonica HOM05D000012 ORTHO05D022856 2.2e-16 89.0 71 57.7
SalBow5G4867 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.8e-16 88.6 92 46.7
unitig_27.g24861 Utricularia gibba HOM05D000012 ORTHO05D003972 2.8e-16 88.6 76 51.3
CANSAT35G1456 Cannabis sativa HOM05D000012 ORTHO05D003972 3.7e-16 88.2 87 50.6
MD04G1148300 Malus domestica HOM05D000012 ORTHO05D003972 4.8e-16 87.8 87 47.1
AUR62021861 Chenopodium quinoa HOM05D000012 ORTHO05D003972 6.3e-16 87.4 76 52.6
Migut.J00198 Erythranthe guttata HOM05D000012 ORTHO05D003972 8.2e-16 87.0 76 50.0
CANSAT35G1359 Cannabis sativa HOM05D000012 ORTHO05D003972 1.1e-15 86.7 77 50.6
Lsat_1_v5_gn_2_3761 Lactuca sativa HOM05D000012 ORTHO05D003972 1.1e-15 86.7 85 55.3
Cpa.g.sc163.8 Carica papaya HOM05D000012 ORTHO05D003972 1.4e-15 86.3 85 47.1
Migut.J00200 Erythranthe guttata HOM05D000012 ORTHO05D003972 1.4e-15 86.3 77 51.9
QL07p035967 Quercus lobata HOM05D000012 ORTHO05D003972 1.4e-15 86.3 84 53.6
Migut.J00193 Erythranthe guttata HOM05D000012 ORTHO05D003972 1.8e-15 85.9 89 47.2
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 2.4e-15 85.5 76 50.0
EL10Ac8g20188 Beta vulgaris HOM05D000012 ORTHO05D003972 5.3e-15 84.3 83 48.2
HanXRQChr08g0211441 Helianthus annuus HOM05D000012 ORTHO05D003972 2.0e-14 82.4 87 51.7
Lsat_1_v5_gn_8_99941 Lactuca sativa HOM05D000012 ORTHO05D003972 2.0e-14 82.4 78 55.1
Prupe.6G272500 Prunus persica HOM05D000012 ORTHO05D003972 2.6e-14 82.0 76 52.6
Cfa013509 Carpinus fangiana HOM05D000012 ORTHO05D003972 4.5e-14 81.3 73 56.2
SalBow1G4398 Salvia bowleyana HOM05D000012 ORTHO05D003972 5.9e-14 80.9 91 46.2
SalBow5G4000 Salvia bowleyana HOM05D000012 ORTHO05D003972 5.9e-14 80.9 76 48.7
Migut.J00197 Erythranthe guttata HOM05D000012 ORTHO05D003972 7.7e-14 80.5 87 42.5
Nitab4.5_0002650g0020 Nicotiana tabacum HOM05D000012 ORTHO05D003972 1.3e-13 79.7 75 53.3
Actinidia01104 Actinidia chinensis HOM05D000012 ORTHO05D003972 2.2e-13 79.0 95 42.1
Haze_20965 Corylus avellana HOM05D000012 ORTHO05D003972 2.9e-13 78.6 73 52.1
unitig_8.g3230 Utricularia gibba HOM05D007005 ORTHO05D008799 2.9e-13 78.6 90 47.8
Migut.D01791 Erythranthe guttata HOM05D000012 ORTHO05D003972 3.8e-13 78.2 75 45.3
Prupe.6G272400 Prunus persica HOM05D000012 ORTHO05D003972 3.8e-13 78.2 76 52.6
Cfa017238 Carpinus fangiana HOM05D000012 ORTHO05D003972 5.0e-13 77.8 76 52.6
ECA236G1283 Erigeron canadensis HOM05D000012 ORTHO05D000567 6.5e-13 77.4 96 44.8
ECA236G0414 Erigeron canadensis HOM05D000012 ORTHO05D003972 1.4e-12 76.3 83 49.4
Nitab4.5_0001264g0210 Nicotiana tabacum HOM05D000012 ORTHO05D003972 1.4e-12 76.3 70 54.3
HanXRQChr04g0102001 Helianthus annuus HOM05D000012 ORTHO05D003972 1.9e-12 75.9 88 50.0
Migut.J00199 Erythranthe guttata HOM05D000012 ORTHO05D003972 7.2e-12 73.9 64 53.1
ECA236G4875 Erigeron canadensis HOM05D000012 ORTHO05D003972 1.2e-11 73.2 90 42.2
Cc06_g01560 Coffea canephora HOM05D000012 ORTHO05D003972 2.1e-11 72.4 76 52.6
Nitab4.5_0002650g0030 Nicotiana tabacum HOM05D000012 ORTHO05D003972 2.1e-11 72.4 71 50.7
HanXRQChr08g0220531 Helianthus annuus HOM05D000012 ORTHO05D003972 2.7e-11 72.0 78 47.4
AUR62021862 Chenopodium quinoa HOM05D000012 ORTHO05D003972 3.6e-11 71.6 77 44.2
Migut.J00192 Erythranthe guttata HOM05D000012 ORTHO05D003972 4.6e-11 71.2 75 44.0
FAN21G1126 Fragaria x ananassa HOM05D000012 ORTHO05D003972 6.1e-11 70.9 76 47.4
EL10Ac8g20185 Beta vulgaris HOM05D000012 ORTHO05D003972 7.9e-11 70.5 79 44.3
TAR636G0546 Trochodendron aralioides HOM05D000012 ORTHO05D003972 1.0e-10 70.1 62 54.8
Peaxi162Scf00299g00813 Petunia axillaris HOM05D000012 ORTHO05D003972 1.4e-10 69.7 54 55.6
THA.LOC104806521 Tarenaya hassleriana HOM05D000012 ORTHO05D003972 1.4e-10 69.7 88 42.0
CSS0025443 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D003972 1.8e-10 69.3 66 51.5
Haze_22102 Corylus avellana HOM05D000012 ORTHO05D003972 2.3e-10 68.9 56 58.9
DCAR_010584 Daucus carota HOM05D000012 ORTHO05D003972 2.3e-10 68.9 76 50.0
Duzib093G0916 Durio zibethinus HOM05D000012 ORTHO05D003972 2.3e-10 68.9 87 41.4
DCAR_018721 Daucus carota HOM05D000012 ORTHO05D003972 3.0e-10 68.6 80 47.5
FvH4_3g33690 Fragaria vesca HOM05D000012 ORTHO05D003972 3.0e-10 68.6 76 46.1
FAN11G0886 Fragaria x ananassa HOM05D000012 ORTHO05D003972 3.0e-10 68.6 76 46.1
CSS0005731 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D003972 3.9e-10 68.2 54 55.6
Ciclev10013636m.g Citrus clementina HOM05D000012 ORTHO05D003972 6.7e-10 67.4 76 42.1
Ah.02g123750 Amaranthus hybridus HOM05D000012 ORTHO05D003972 8.8e-10 67.0 75 42.7
Haze_20969 Corylus avellana HOM05D000012 ORTHO05D164511 8.8e-10 67.0 61 52.5
AUR62012790 Chenopodium quinoa HOM05D000012 ORTHO05D003972 2.0e-09 65.9 76 42.1
TAR623G0818 Trochodendron aralioides HOM05D000012 ORTHO05D003972 2.0e-09 65.9 54 53.7
AUR62021863 Chenopodium quinoa HOM05D000012 ORTHO05D003972 2.5e-09 65.5 76 40.8
SalBow5G2865 Salvia bowleyana HOM05D000012 ORTHO05D003972 3.3e-09 65.1 78 42.3
EL10Ac8g20184 Beta vulgaris HOM05D000012 ORTHO05D003972 9.7e-09 63.5 84 36.9
CSS0007123 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D003972 9.7e-09 63.5 62 43.5
Migut.J00194 Erythranthe guttata HOM05D000012 ORTHO05D003972 9.7e-09 63.5 73 42.5
FAN19G1920 Fragaria x ananassa HOM05D000012 ORTHO05D003972 9.7e-09 63.5 79 41.8
SalBow5G4034 Salvia bowleyana HOM05D000012 ORTHO05D003972 9.7e-09 63.5 70 44.3
DCAR_010585 Daucus carota HOM05D000012 ORTHO05D003972 2.2e-08 62.4 91 41.8
FAN23G1597 Fragaria x ananassa HOM05D000012 ORTHO05D003972 2.8e-08 62.0 79 40.5
SalBow5G5066 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.8e-08 62.0 73 39.7
SalBow5G2554 Salvia bowleyana HOM05D000012 ORTHO05D003972 3.7e-08 61.6 73 39.7
SalBow5G2769 Salvia bowleyana HOM05D000012 ORTHO05D022856 3.7e-08 61.6 67 44.8
SalBow5G2834 Salvia bowleyana HOM05D000012 ORTHO05D003972 3.7e-08 61.6 73 39.7
SalBow5G4460 Salvia bowleyana HOM05D000012 ORTHO05D003972 3.7e-08 61.6 73 39.7
FvH4_1g04590 Fragaria vesca HOM05D000012 ORTHO05D003972 4.8e-08 61.2 79 40.5
FvH4_1g04640 Fragaria vesca HOM05D000012 ORTHO05D003972 4.8e-08 61.2 79 40.5
FAN02G1045 Fragaria x ananassa HOM05D000012 ORTHO05D003972 4.8e-08 61.2 83 42.2
MD12G1161800 Malus domestica HOM05D000012 ORTHO05D022856 4.8e-08 61.2 70 44.3
FAN25G1256 Fragaria x ananassa HOM05D000012 ORTHO05D003972 8.2e-08 60.5 63 47.6
Actinidia05351 Actinidia chinensis HOM05D000012 ORTHO05D003972 1.4e-07 59.7 58 43.1
FvH4_6g11880 Fragaria vesca HOM05D000012 ORTHO05D003972 1.4e-07 59.7 83 42.2
FAN14G2604 Fragaria x ananassa HOM05D000012 ORTHO05D003972 1.4e-07 59.7 83 42.2
FAN14G4999 Fragaria x ananassa HOM05D000012 ORTHO05D003972 1.4e-07 59.7 83 42.2
Ah.09g234220 Amaranthus hybridus HOM05D000012 ORTHO05D003972 1.8e-07 59.3 55 49.1
EL10Ac8g20183 Beta vulgaris HOM05D000012 ORTHO05D003972 3.1e-07 58.5 45 57.8
Aa31sc236G20 Aethionema arabicum HOM05D000012 ORTHO05D003972 5.3e-07 57.8 86 39.5
Peaxi162Scf00299g00859 Petunia axillaris HOM05D000012 ORTHO05D003972 5.3e-07 57.8 51 49.0
EL10Ac6g15227 Beta vulgaris HOM05D000012 ORTHO05D003972 9.1e-07 57.0 70 41.4
Cfa017243 Carpinus fangiana HOM05D000012 ORTHO05D003972 1.2e-06 56.6 51 52.9
Oeu055172.1 Olea europaea HOM05D000012 ORTHO05D003972 1.2e-06 56.6 69 43.5
HanXRQChr06g0182311 Helianthus annuus HOM05D000012 ORTHO05D003972 1.5e-06 56.2 62 45.2
Oeu030520.1 Olea europaea HOM05D000012 ORTHO05D003972 2.6e-06 55.5 52 50.0
RcHm_v2.0_Chr5g0061211 Rosa chinensis HOM05D000012 ORTHO05D003972 2.6e-06 55.5 50 52.0
SalBow5G1091 Salvia bowleyana HOM05D000012 ORTHO05D003972 7.7e-06 53.9 77 35.1


User provided reference genes

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