Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P916T18 Lonicera japonica HOM05D000172 ORTHO05D000273 9.7e-30 132.9 70 100.0
Lj3C917T0 Lonicera japonica HOM05D000172 ORTHO05D000273 1.1e-20 102.8 70 75.7
Lj6P305T16 Lonicera japonica HOM05D000172 ORTHO05D000273 7.2e-17 90.1 70 61.4
Lju124C19T17 Lonicera japonica HOM05D000172 ORTHO05D000273 7.2e-17 90.1 68 61.8
Lj1P1008T32 Lonicera japonica HOM05D000172 ORTHO05D000273 1.2e-16 89.4 69 63.8
Lj6P306T10 Lonicera japonica HOM05D000172 ORTHO05D000273 1.2e-16 89.4 70 61.4
Lju124P21T14 Lonicera japonica HOM05D000172 ORTHO05D000273 3.6e-16 87.8 70 61.4
Lj1P1008T31 Lonicera japonica HOM05D000172 ORTHO05D000273 6.1e-16 87.0 69 60.9
Lj3C916T7 Lonicera japonica HOM05D000172 ORTHO05D000273 3.9e-15 84.3 69 62.3
Lj3A916T21 Lonicera japonica HOM05D000172 ORTHO05D000273 2.0e-14 82.0 70 64.3
Lj3C916T6 Lonicera japonica HOM05D000172 ORTHO05D000273 2.0e-14 82.0 70 64.3
Lj3C917T1 Lonicera japonica HOM05D000172 ORTHO05D000273 2.0e-14 82.0 70 64.3
Migut.F00270 Erythranthe guttata HOM05D000172 ORTHO05D000273 8.2e-13 76.6 70 50.0
MSTRG.70 Avicennia marina HOM05D000172 ORTHO05D000273 5.3e-12 73.9 70 44.3
Migut.F00269 Erythranthe guttata HOM05D000172 ORTHO05D000273 5.3e-12 73.9 69 46.4
Migut.F00268 Erythranthe guttata HOM05D000172 ORTHO05D000273 2.0e-11 72.0 69 46.4
Actinidia31848 Actinidia chinensis HOM05D000172 ORTHO05D000273 3.5e-11 71.2 64 51.6
Actinidia03146 Actinidia chinensis HOM05D000172 ORTHO05D000273 1.7e-10 68.9 62 48.4
MSTRG.27070 Avicennia marina HOM05D000172 ORTHO05D000273 1.7e-10 68.9 69 43.5
Cc00_g20010 Coffea canephora HOM05D000172 ORTHO05D000273 2.2e-10 68.6 69 47.8
Dinv28367 Davidia involucrata HOM05D000172 ORTHO05D000273 2.2e-10 68.6 69 43.5
Actinidia34170 Actinidia chinensis HOM05D000172 ORTHO05D000273 2.9e-10 68.2 67 47.8
MD07G1281600 Malus domestica HOM05D000172 ORTHO05D000273 2.9e-10 68.2 69 46.4
Actinidia34183 Actinidia chinensis HOM05D000172 ORTHO05D000273 5.0e-10 67.4 67 47.8
Hma1.2p1_0327F.1_g126550 Hydrangea macrophylla HOM05D000172 ORTHO05D000273 5.0e-10 67.4 70 45.7
SalBow4G1460 Salvia bowleyana HOM05D000172 ORTHO05D000273 5.0e-10 67.4 63 44.4
Actinidia08598 Actinidia chinensis HOM05D000172 ORTHO05D000273 6.5e-10 67.0 69 47.8
SalBow4G0959 Salvia bowleyana HOM05D000172 ORTHO05D000273 6.5e-10 67.0 63 44.4
Cc10_g12220 Coffea canephora HOM05D000172 ORTHO05D000273 8.5e-10 66.6 64 48.4
SalBow4G1153 Salvia bowleyana HOM05D000172 ORTHO05D000273 8.5e-10 66.6 63 44.4
Actinidia03147 Actinidia chinensis HOM05D000172 ORTHO05D000273 1.1e-09 66.2 55 56.4
Actinidia08597 Actinidia chinensis HOM05D000172 ORTHO05D000273 1.1e-09 66.2 72 45.8
Cc00_g20040 Coffea canephora HOM05D000172 ORTHO05D000273 1.1e-09 66.2 71 49.3
CSS0049601 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 1.5e-09 65.9 67 44.8
Cc10_g12230 Coffea canephora HOM05D000172 ORTHO05D000273 1.5e-09 65.9 67 46.3
Dinv28368 Davidia involucrata HOM05D000172 ORTHO05D000273 1.5e-09 65.9 69 43.5
SalBow4G2619 Salvia bowleyana HOM05D000172 ORTHO05D000273 1.9e-09 65.5 63 42.9
Dinv08218 Davidia involucrata HOM05D000172 ORTHO05D000273 3.2e-09 64.7 69 42.0
Actinidia08596 Actinidia chinensis HOM05D000172 ORTHO05D000273 4.2e-09 64.3 61 50.8
Actinidia08599 Actinidia chinensis HOM05D000172 ORTHO05D000273 4.2e-09 64.3 63 49.2
Dinv35284 Davidia involucrata HOM05D000172 ORTHO05D000273 4.2e-09 64.3 70 40.0
vmacro10087 Vaccinium macrocarpon HOM05D000172 ORTHO05D000273 4.2e-09 64.3 69 40.6
Actinidia34169 Actinidia chinensis HOM05D000172 ORTHO05D000273 7.2e-09 63.5 68 47.1
Actinidia08595 Actinidia chinensis HOM05D000172 ORTHO05D000273 9.4e-09 63.2 68 48.5
Actinidia34171 Actinidia chinensis HOM05D000172 ORTHO05D000273 9.4e-09 63.2 62 48.4
COL.COLO4_08345 Corchorus olitorius HOM05D000172 ORTHO05D000273 1.2e-08 62.8 69 43.5
Dinv35280 Davidia involucrata HOM05D000172 ORTHO05D000273 1.2e-08 62.8 70 45.7
Dinv35281 Davidia involucrata HOM05D000172 ORTHO05D000273 1.2e-08 62.8 70 45.7
Lsat_1_v5_gn_2_133440 Lactuca sativa HOM05D000172 ORTHO05D000273 1.6e-08 62.4 69 43.5
Oeu037138.1 Olea europaea HOM05D000172 ORTHO05D000273 1.6e-08 62.4 59 45.8
Actinidia31850 Actinidia chinensis HOM05D000172 ORTHO05D000273 3.6e-08 61.2 70 41.4
MSTRG.8695 Avicennia marina HOM05D000172 ORTHO05D000273 3.6e-08 61.2 59 44.1
COL.COLO4_30265 Corchorus olitorius HOM05D000172 ORTHO05D000273 3.6e-08 61.2 69 39.1
Dinv42336 Davidia involucrata HOM05D000172 ORTHO05D000273 3.6e-08 61.2 70 42.9
FvH4_7g30570 Fragaria vesca HOM05D000172 ORTHO05D000273 3.6e-08 61.2 69 40.6
FAN06G1265 Fragaria x ananassa HOM05D000172 ORTHO05D000273 3.6e-08 61.2 69 40.6
FAN06G1853 Fragaria x ananassa HOM05D000172 ORTHO05D000273 3.6e-08 61.2 69 40.6
FAN10G0530 Fragaria x ananassa HOM05D000100 ORTHO05D000052 3.6e-08 61.2 69 40.6
FAN10G1455 Fragaria x ananassa HOM05D000100 ORTHO05D000052 3.6e-08 61.2 69 40.6
HanXRQChr14g0462621 Helianthus annuus HOM05D000172 ORTHO05D000273 3.6e-08 61.2 69 44.9
Actinidia31849 Actinidia chinensis HOM05D000172 ORTHO05D000273 4.7e-08 60.8 65 49.2
Dinv35282 Davidia involucrata HOM05D000172 ORTHO05D000273 4.7e-08 60.8 70 41.4
CSS0000165 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 6.1e-08 60.5 65 40.0
Duzib205G0667 Durio zibethinus HOM05D000172 ORTHO05D000273 8.0e-08 60.1 69 39.1
MD06G1094400 Malus domestica HOM05D000172 ORTHO05D000273 8.0e-08 60.1 71 43.7
Actinidia03148 Actinidia chinensis HOM05D000172 ORTHO05D000273 1.0e-07 59.7 46 56.5
Dinv28366 Davidia involucrata HOM05D000172 ORTHO05D000273 1.0e-07 59.7 63 41.3
Migut.E01213 Erythranthe guttata HOM05D000172 ORTHO05D000273 1.0e-07 59.7 60 46.7
Migut.E01214 Erythranthe guttata HOM05D000172 ORTHO05D000273 1.0e-07 59.7 60 46.7
TAR629G1323 Trochodendron aralioides HOM05D000172 ORTHO05D000273 1.0e-07 59.7 69 36.2
TAR629G2872 Trochodendron aralioides HOM05D000172 ORTHO05D000273 1.0e-07 59.7 69 36.2
Eucgr.L03223 Eucalyptus grandis HOM05D000172 ORTHO05D000273 1.4e-07 59.3 69 36.2
MD06G1094300 Malus domestica HOM05D000172 ORTHO05D000273 1.4e-07 59.3 71 43.7
TAR629G0226 Trochodendron aralioides HOM05D000172 ORTHO05D000273 1.4e-07 59.3 69 37.7
CSS0022466 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 1.8e-07 58.9 63 41.3
FAN13G2033 Fragaria x ananassa HOM05D000172 ORTHO05D000273 1.8e-07 58.9 69 43.5
Thecc.03G287600 Theobroma cacao HOM05D000172 ORTHO05D000273 1.8e-07 58.9 69 37.7
Haze_00073 Corylus avellana HOM05D000172 ORTHO05D000273 2.3e-07 58.5 69 43.5
Duzib068G1459 Durio zibethinus HOM05D000172 ORTHO05D000273 2.3e-07 58.5 69 40.6
Eucgr.J02118 Eucalyptus grandis HOM05D000172 ORTHO05D000273 2.3e-07 58.5 69 36.2
Gorai.006G199800 Gossypium raimondii HOM05D000172 ORTHO05D000273 2.3e-07 58.5 69 40.6
Prupe.2G303300 Prunus persica HOM05D000172 ORTHO05D000273 2.3e-07 58.5 71 38.0
CSS0024098 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 3.0e-07 58.2 65 38.5
Eucgr.E00802 Eucalyptus grandis HOM05D000172 ORTHO05D000273 3.0e-07 58.2 69 36.2
Eucgr.L03222 Eucalyptus grandis HOM05D000172 ORTHO05D000273 3.0e-07 58.2 69 36.2
MD14G1114700 Malus domestica HOM05D000172 ORTHO05D000273 3.0e-07 58.2 71 42.3
RcHm_v2.0_Chr1g0379411 Rosa chinensis HOM05D000172 ORTHO05D000273 3.0e-07 58.2 69 37.7
Thecc.03G187600 Theobroma cacao HOM05D000172 ORTHO05D000273 3.0e-07 58.2 69 42.0
CSS0009703 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 4.0e-07 57.8 63 41.3
CSS0040854 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 4.0e-07 57.8 63 41.3
DCAR_023389 Daucus carota HOM05D000172 ORTHO05D000273 4.0e-07 57.8 70 41.4
Manes.06G154100 Manihot esculenta HOM05D000172 ORTHO05D000273 4.0e-07 57.8 71 43.7
Oeu009292.1 Olea europaea HOM05D000172 ORTHO05D000273 4.0e-07 57.8 60 40.0
CSS0033847 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 5.2e-07 57.4 63 41.3
PGR042G3751 Punica granatum HOM05D000172 ORTHO05D000273 5.2e-07 57.4 69 40.6
TAR629G0159 Trochodendron aralioides HOM05D000172 ORTHO05D000273 5.2e-07 57.4 69 36.2
GSVIVG01028798001 Vitis vinifera HOM05D000172 ORTHO05D000273 5.2e-07 57.4 69 39.1
COL.COLO4_08344 Corchorus olitorius HOM05D000172 ORTHO05D000273 6.7e-07 57.0 61 44.3
QL02p033060 Quercus lobata HOM05D000172 ORTHO05D000273 6.7e-07 57.0 67 35.8
FAN08G3051 Fragaria x ananassa HOM05D000172 ORTHO05D000273 8.8e-07 56.6 69 42.0
FAN13G1449 Fragaria x ananassa HOM05D000172 ORTHO05D000273 8.8e-07 56.6 69 42.0
QL02p033029 Quercus lobata HOM05D000172 ORTHO05D000273 8.8e-07 56.6 68 35.3
Cc00_g20030 Coffea canephora HOM05D000172 ORTHO05D000273 1.2e-06 56.2 69 39.1
COL.COLO4_36741 Corchorus olitorius HOM05D000172 ORTHO05D000273 1.2e-06 56.2 69 39.1
TAR629G2799 Trochodendron aralioides HOM05D000172 ORTHO05D000273 1.2e-06 56.2 69 37.7
Dinv35283 Davidia involucrata HOM05D000172 ORTHO05D000273 1.5e-06 55.8 55 43.6
Eucgr.E00793 Eucalyptus grandis HOM05D000172 ORTHO05D000273 1.5e-06 55.8 71 40.8
Eucgr.E00798 Eucalyptus grandis HOM05D000172 ORTHO05D000273 1.5e-06 55.8 71 42.3
FAN04G0660 Fragaria x ananassa HOM05D000172 ORTHO05D000273 1.5e-06 55.8 69 42.0
Gohir.A09G183000 Gossypium hirsutum HOM05D000172 ORTHO05D000273 1.5e-06 55.8 69 39.1
MD14G1113800 Malus domestica HOM05D000172 ORTHO05D000273 1.5e-06 55.8 70 32.9
PGR042G3151 Punica granatum HOM05D000172 ORTHO05D000273 1.5e-06 55.8 70 37.1
Thecc.03G187700 Theobroma cacao HOM05D000172 ORTHO05D000273 1.5e-06 55.8 70 37.1
SalBow4G0511 Salvia bowleyana HOM05D000172 ORTHO05D000273 2.0e-06 55.5 63 36.5
Thecc.03G287700 Theobroma cacao HOM05D000172 ORTHO05D000273 2.0e-06 55.5 60 41.7
Actinidia31847 Actinidia chinensis HOM05D000172 ORTHO05D000273 2.6e-06 55.1 70 37.1
MSTRG.13865 Avicennia marina HOM05D000172 ORTHO05D000273 2.6e-06 55.1 71 40.8
Eucgr.E00788 Eucalyptus grandis HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 33.3
Eucgr.E00790 Eucalyptus grandis HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 33.3
Gohir.D09G175800 Gossypium hirsutum HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 37.7
Gorai.006G197900 Gossypium raimondii HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 37.7
MD07G1281400 Malus domestica HOM05D000172 ORTHO05D000273 2.6e-06 55.1 70 38.6
QL02p032896 Quercus lobata HOM05D000172 ORTHO05D000273 2.6e-06 55.1 67 34.3
RcHm_v2.0_Chr7g0196341 Rosa chinensis HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 36.2
SalBow2G1146 Salvia bowleyana HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 44.9
SalBow4G2709 Salvia bowleyana HOM05D000172 ORTHO05D000273 2.6e-06 55.1 61 36.1
Thecc.03G187100 Theobroma cacao HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 37.7
TAR629G2505 Trochodendron aralioides HOM05D000172 ORTHO05D000273 2.6e-06 55.1 69 36.2
Cc06_g14250 Coffea canephora HOM05D000172 ORTHO05D000273 3.3e-06 54.7 70 42.9
Gohir.A09G181300 Gossypium hirsutum HOM05D000172 ORTHO05D000273 3.3e-06 54.7 69 37.7
QL02p033051 Quercus lobata HOM05D000172 ORTHO05D000273 3.3e-06 54.7 69 34.8
Cfa016319 Carpinus fangiana HOM05D000172 ORTHO05D000273 4.4e-06 54.3 70 42.9
Cfa016320 Carpinus fangiana HOM05D000172 ORTHO05D000273 4.4e-06 54.3 70 42.9
PGR042G0707 Punica granatum HOM05D000172 ORTHO05D000273 4.4e-06 54.3 69 36.2
PGR042G0737 Punica granatum HOM05D000172 ORTHO05D000273 4.4e-06 54.3 70 35.7
QL02p033026 Quercus lobata HOM05D000172 ORTHO05D000273 4.4e-06 54.3 67 34.3
RcHm_v2.0_Chr7g0196391 Rosa chinensis HOM05D000172 ORTHO05D000273 4.4e-06 54.3 69 36.2
TAR629G3256 Trochodendron aralioides HOM05D000172 ORTHO05D000273 4.4e-06 54.3 69 34.8
Cc00_g20020 Coffea canephora HOM05D000172 ORTHO05D000273 5.7e-06 53.9 66 37.9
ECA238G2110 Erigeron canadensis HOM05D000172 ORTHO05D000273 5.7e-06 53.9 69 39.1
Eucgr.E00800 Eucalyptus grandis HOM05D000172 ORTHO05D000273 5.7e-06 53.9 69 37.7
MD01G1210900 Malus domestica HOM05D000172 ORTHO05D000273 5.7e-06 53.9 70 40.0
PGR042G3547 Punica granatum HOM05D000172 ORTHO05D000273 5.7e-06 53.9 69 34.8
QL09p012172 Quercus lobata HOM05D000172 ORTHO05D000273 5.7e-06 53.9 60 40.0
TAR629G1628 Trochodendron aralioides HOM05D000172 ORTHO05D000273 5.7e-06 53.9 70 31.4
CiPaw.11G128700 Carya illinoinensis HOM05D000172 ORTHO05D000273 7.5e-06 53.5 69 36.2
COL.COLO4_30266 Corchorus olitorius HOM05D000172 ORTHO05D000273 7.5e-06 53.5 71 40.8
Dinv35276 Davidia involucrata HOM05D000806 ORTHO05D000273 7.5e-06 53.5 64 40.6
Duzib068G1221 Durio zibethinus HOM05D000172 ORTHO05D000273 7.5e-06 53.5 70 35.7
Duzib084G0687 Durio zibethinus HOM05D000172 ORTHO05D000273 7.5e-06 53.5 70 37.1
MD06G1093100 Malus domestica HOM05D000172 ORTHO05D000273 7.5e-06 53.5 70 30.0
QL02p032960 Quercus lobata HOM05D000172 ORTHO05D000273 7.5e-06 53.5 67 34.3
QL02p032978 Quercus lobata HOM05D000172 ORTHO05D000273 7.5e-06 53.5 67 31.3
RcHm_v2.0_Chr7g0196381 Rosa chinensis HOM05D000172 ORTHO05D000273 7.5e-06 53.5 69 36.2
RcHm_v2.0_Chr7g0222891 Rosa chinensis HOM05D000172 ORTHO05D000273 7.5e-06 53.5 70 35.7
vmacro09805 Vaccinium macrocarpon HOM05D000172 ORTHO05D000273 7.5e-06 53.5 69 36.2
vmacro10086 Vaccinium macrocarpon HOM05D000172 ORTHO05D000273 7.5e-06 53.5 69 36.2
Duzib205G1643 Durio zibethinus HOM05D000172 ORTHO05D000273 9.7e-06 53.1 70 35.7
Eucgr.J02119 Eucalyptus grandis HOM05D000172 ORTHO05D000273 9.7e-06 53.1 69 33.3
QL02p033104 Quercus lobata HOM05D000172 ORTHO05D000273 9.7e-06 53.1 68 35.3


User provided reference genes

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