Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 1.7e-58 229.2 119 100.0
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-36 156.8 119 68.9
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 4.0e-36 154.8 119 66.4
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-35 152.9 119 64.7
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-33 146.7 112 70.5
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.9e-22 109.4 118 47.5
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 4.8e-21 104.8 115 49.6
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-20 103.6 104 51.9
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 8.5e-18 94.0 116 42.2
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 2.7e-16 89.0 116 43.1
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 7.9e-16 87.4 101 41.6
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.3e-14 82.0 116 40.5
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.7e-14 81.3 121 45.5
Lj1P1006T30 Lonicera japonica HOM05D008183 ORTHO05D007254 7.4e-14 80.9 118 43.2
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.8e-13 79.0 116 38.8
Lj5P293T5 Lonicera japonica HOM05D008183 ORTHO05D007254 3.7e-13 78.6 96 42.7
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 6.3e-13 77.8 115 37.4
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.2e-13 77.4 116 37.9
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-12 77.0 102 40.2
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-12 76.6 90 50.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-12 76.3 116 38.8
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-12 76.3 116 38.8
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.8e-12 76.3 116 38.8
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-12 75.9 116 37.9
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 3.1e-12 75.5 116 37.9
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.3e-12 74.7 102 42.2
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 6.9e-12 74.3 116 37.9
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.9e-12 74.3 116 38.8
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.1e-12 73.9 115 37.4
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 1.5e-11 73.2 116 39.7
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.5e-11 71.6 116 37.9
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.5e-11 71.6 100 40.0
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 4.5e-11 71.6 114 35.1
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.9e-11 71.2 116 36.2
TWI81G0012 Tripterygium wilfordii HOM05D000155 ORTHO05D000022 7.7e-11 70.9 116 33.6
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-10 70.1 78 43.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-10 70.1 116 35.3
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.3e-10 70.1 116 37.9
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.7e-10 69.7 116 35.3
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.9e-10 68.9 90 42.2
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.0e-10 68.2 100 38.0
Lj9P695T39 Lonicera japonica HOM05D008183 ORTHO05D007254 6.5e-10 67.8 63 54.0
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.5e-10 67.4 113 33.6
Lj1P880T38 Lonicera japonica HOM05D008183 ORTHO05D007254 8.5e-10 67.4 78 44.9
Lj3P938T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-09 67.0 75 42.7
Lju225C5T9 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-09 67.0 76 48.7
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-09 65.5 116 36.2
Eucgr.B00966 Eucalyptus grandis HOM05D008183 ORTHO05D007254 3.2e-09 65.5 117 33.3
Lj8P115T49 Lonicera japonica HOM05D008183 ORTHO05D007254 5.5e-09 64.7 71 46.5
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 9.4e-09 63.9 114 30.7
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-08 63.5 115 34.8
Sc20g0000530 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.2e-08 63.5 115 37.4
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 1.6e-08 63.2 114 30.7
Lj3C625T2 Lonicera japonica HOM05D008183 ORTHO05D007254 1.6e-08 63.2 82 39.0
FvH4_3g19950 Fragaria vesca HOM05D002732 ORTHO05D002955 2.1e-08 62.8 79 39.2
COL.COLO4_17181 Corchorus olitorius HOM05D008183 ORTHO05D007254 4.7e-08 61.6 122 32.8
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 4.7e-08 61.6 114 36.8
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.1e-08 61.2 117 35.0
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.9e-08 60.8 85 41.2
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 7.9e-08 60.8 76 50.0
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.0e-07 60.5 116 33.6
COL.COLO4_20392 Corchorus olitorius HOM05D000003 ORTHO05D000167 1.4e-07 60.1 116 30.2
Hund22573 Selenicereus undatus HOM05D000003 ORTHO05D000022 1.4e-07 60.1 116 34.5
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 2.3e-07 59.3 65 44.6
Lj7C433G3 Lonicera japonica HOM05D000005 ORTHO05D007073 2.3e-07 59.3 100 38.0
Rhsim01G0194100 Rhododendron simsii HOM05D018264 ORTHO05D018096 2.3e-07 59.3 114 34.2
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.3e-07 59.3 116 33.6
COL.COLO4_30555 Corchorus olitorius HOM05D000003 ORTHO05D000167 3.9e-07 58.5 119 31.1
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-07 58.5 116 31.0
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 5.1e-07 58.2 80 36.2
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.1e-07 58.2 118 35.6
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 5.1e-07 58.2 96 33.3
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-07 57.8 115 31.3
COL.COLO4_06385 Corchorus olitorius HOM05D000395 ORTHO05D009449 8.8e-07 57.4 117 29.1
COL.COLO4_15333 Corchorus olitorius HOM05D064659 ORTHO05D000022 8.8e-07 57.4 92 33.7
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.8e-07 57.4 108 32.4
Lj3A1052T27 Lonicera japonica HOM05D008183 ORTHO05D007254 8.8e-07 57.4 118 33.1
SHI31015 Sapria himalayana HOM05D000024 ORTHO05D000022 1.5e-06 56.6 113 31.9
TAR473G0001 Trochodendron aralioides HOM05D000155 ORTHO05D000022 1.5e-06 56.6 104 27.9
COL.COLO4_04041 Corchorus olitorius HOM05D008133 ORTHO05D007254 2.0e-06 56.2 116 32.8
Eucgr.D02197 Eucalyptus grandis HOM05D008183 ORTHO05D007254 2.0e-06 56.2 103 31.1
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 2.0e-06 56.2 117 33.3
RcHm_v2.0_Chr1g0374401 Rosa chinensis HOM05D000106 ORTHO05D010272 2.0e-06 56.2 95 34.7
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.6e-06 55.8 116 33.6
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.6e-06 55.8 116 33.6
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.6e-06 55.8 101 31.7
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.6e-06 55.8 119 30.3
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.6e-06 55.8 116 31.9
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.6e-06 55.8 116 31.9
Rhsim04G0031400 Rhododendron simsii HOM05D000289 ORTHO05D007254 2.6e-06 55.8 71 40.8
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 3.3e-06 55.5 115 38.3
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.3e-06 55.5 118 35.6
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 3.3e-06 55.5 114 28.9
Sc04g0000500 Simmondsia chinensis HOM05D000704 ORTHO05D000526 3.3e-06 55.5 90 36.7
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 4.4e-06 55.1 116 25.9
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.4e-06 55.1 97 33.0
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 5.7e-06 54.7 115 38.3
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 5.7e-06 54.7 115 39.1
COL.COLO4_22912 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.7e-06 54.7 70 40.0
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 5.7e-06 54.7 100 28.0
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 5.7e-06 54.7 114 29.8
SHI06312 Sapria himalayana HOM05D000024 ORTHO05D000007 5.7e-06 54.7 113 31.0
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 54.3 117 29.1
Sc06g0010720 Simmondsia chinensis HOM05D009348 ORTHO05D015627 7.4e-06 54.3 100 32.0
SHI36923 Sapria himalayana HOM05D004990 ORTHO05D000022 9.7e-06 53.9 113 32.7
SHI41116 Sapria himalayana HOM05D000024 ORTHO05D000007 9.7e-06 53.9 113 29.2


User provided reference genes

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