Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P789T14 Lonicera japonica HOM05D000264 ORTHO05D000152 8.3e-52 206.8 110 100.0
Lj3C788T5 Lonicera japonica HOM05D000264 ORTHO05D000152 1.2e-47 193.0 110 93.6
Lj3P783T47 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-27 126.7 107 65.4
Lj3P782T23 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-27 126.3 107 66.4
Lj3C789G0 Lonicera japonica HOM05D000264 ORTHO05D000152 3.2e-27 125.2 107 67.3
Lj3P783T34 Lonicera japonica HOM05D000264 ORTHO05D000152 3.2e-27 125.2 109 64.2
Lj5A329T14 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-25 119.0 110 62.7
Lj3A789G30 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-24 116.7 111 60.4
Lj3C787T12 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-24 116.7 107 60.7
Lj5P330T15 Lonicera japonica HOM05D000264 ORTHO05D000152 2.4e-22 109.0 100 64.0
Lj5C330G1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-21 106.3 100 61.0
Lj5P331T25 Lonicera japonica HOM05D000264 ORTHO05D000152 2.6e-21 105.5 100 61.0
Lj3C560G2 Lonicera japonica HOM05D000264 ORTHO05D000152 4.4e-21 104.8 114 59.6
Lj8P320T36 Lonicera japonica HOM05D000264 ORTHO05D000152 4.6e-18 94.7 96 57.3
Lj5A330G31 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-14 83.2 100 51.0
Lj3C383T1 Lonicera japonica HOM05D000490 ORTHO05D000152 1.8e-14 82.8 103 50.5
Lj3C792T0 Lonicera japonica HOM05D000264 ORTHO05D000152 9.0e-14 80.5 99 49.5
Lj3A384G20 Lonicera japonica HOM05D000264 ORTHO05D000152 1.2e-13 80.1 105 51.4
Lj3A780G47 Lonicera japonica HOM05D000264 ORTHO05D000152 3.4e-13 78.6 99 53.5
CSS0045020 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 9.9e-13 77.0 105 40.0
Lj3A780G48 Lonicera japonica HOM05D000264 ORTHO05D000152 9.9e-13 77.0 99 52.5
Lj3C466T4 Lonicera japonica HOM05D000264 ORTHO05D000152 9.9e-13 77.0 100 51.0
Lj3P790T10 Lonicera japonica HOM05D000264 ORTHO05D000152 2.9e-12 75.5 46 93.5
Lj3A788T31 Lonicera japonica HOM05D000264 ORTHO05D000152 3.8e-12 75.1 70 62.9
Lj3C490G4 Lonicera japonica HOM05D000264 ORTHO05D000152 3.8e-12 75.1 99 46.5
Lj3C487G1 Lonicera japonica HOM05D000264 ORTHO05D000152 6.4e-12 74.3 110 49.1
Lj3P787T25 Lonicera japonica HOM05D000264 ORTHO05D000152 6.4e-12 74.3 99 50.5
Lj3C492G1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-11 73.6 99 47.5
Lj3C493G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-11 73.6 99 48.5
Dinv09002 Davidia involucrata HOM05D000264 ORTHO05D000152 1.4e-11 73.2 110 39.1
Lj3C462G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-11 73.2 110 48.2
Lj3A493G26 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-11 72.8 99 48.5
Lj3C494G1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-11 72.8 100 47.0
Lj3A465G34 Lonicera japonica HOM05D000264 ORTHO05D000152 2.4e-11 72.4 106 43.4
Lj3A793T36 Lonicera japonica HOM05D000264 ORTHO05D000152 5.4e-11 71.2 103 42.7
Dinv44628 Davidia involucrata HOM05D000264 ORTHO05D000152 9.3e-11 70.5 102 40.2
Lj3A465G35 Lonicera japonica HOM05D000264 ORTHO05D000152 9.3e-11 70.5 99 47.5
Lj3C786G2 Lonicera japonica HOM05D030704 ORTHO05D000152 6.0e-10 67.8 67 58.2
Lj3A780G50 Lonicera japonica HOM05D000264 ORTHO05D000152 7.8e-10 67.4 100 44.0
Lj3C673G1 Lonicera japonica HOM05D000264 ORTHO05D000152 7.8e-10 67.4 99 44.4
DCAR_009590 Daucus carota HOM05D000264 ORTHO05D000152 2.3e-09 65.9 106 37.7
GSVIVG01001636001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.3e-09 65.9 100 41.0
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 3.0e-09 65.5 102 39.2
Lj3A662G12 Lonicera japonica HOM05D000264 ORTHO05D000152 3.0e-09 65.5 108 46.3
Dinv44629 Davidia involucrata HOM05D000264 ORTHO05D000152 3.9e-09 65.1 101 40.6
GSVIVG01013543001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.6e-09 64.3 100 39.0
CSS0045785 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.1e-08 63.5 100 40.0
Sabra19G0137200 Salix brachista HOM05D021030 ORTHO05D000152 1.5e-08 63.2 90 45.6
Sabra19G0137300 Salix brachista HOM05D021030 ORTHO05D000152 1.5e-08 63.2 90 45.6
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 1.9e-08 62.8 105 39.0
Manes.03G169300 Manihot esculenta HOM05D000264 ORTHO05D000152 1.9e-08 62.8 100 41.0
Ciclev10006407m.g Citrus clementina HOM05D000264 ORTHO05D000152 3.3e-08 62.0 110 37.3
Dinv29923 Davidia involucrata HOM05D000264 ORTHO05D000152 3.3e-08 62.0 91 41.8
GSVIVG01013591001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.3e-08 62.0 95 38.9
Thecc.10G061700 Theobroma cacao HOM05D000264 ORTHO05D000152 4.3e-08 61.6 107 39.3
CSS0044576 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 5.6e-08 61.2 101 37.6
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 5.6e-08 61.2 108 37.0
Lj3C790G3 Lonicera japonica HOM05D000264 ORTHO05D000152 5.6e-08 61.2 79 44.3
Manes.14G154708 Manihot esculenta HOM05D000264 ORTHO05D000152 5.6e-08 61.2 103 39.8
Oeu032599.1 Olea europaea HOM05D000264 ORTHO05D000152 5.6e-08 61.2 101 39.6
Hma1.2p1_0893F.1_g233520 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 7.3e-08 60.8 100 38.0
DCAR_005184 Daucus carota HOM05D000264 ORTHO05D000152 9.6e-08 60.5 107 36.4
Lj8A321T36 Lonicera japonica HOM05D000264 ORTHO05D235322 9.6e-08 60.5 42 66.7
Oeu020735.1 Olea europaea HOM05D000264 ORTHO05D000152 9.6e-08 60.5 101 37.6
Dinv14028 Davidia involucrata HOM05D000264 ORTHO05D000152 1.3e-07 60.1 102 40.2
GSVIVG01020902001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.3e-07 60.1 94 38.3
vmacro08446 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.6e-07 59.7 98 42.9
Ciclev10004657m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.1e-07 59.3 90 37.8
DCAR_005089 Daucus carota HOM05D000264 ORTHO05D000152 2.1e-07 59.3 107 34.6
DCAR_005098 Daucus carota HOM05D000264 ORTHO05D000152 2.1e-07 59.3 107 34.6
Manes.14G151654 Manihot esculenta HOM05D000264 ORTHO05D000152 2.1e-07 59.3 102 38.2
GSVIVG01001631001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.1e-07 59.3 101 35.6
Atru.chr4.2245 Acer truncatum HOM05D000264 ORTHO05D000152 2.8e-07 58.9 94 41.5
CANSAT78G0315 Cannabis sativa HOM05D000264 ORTHO05D000152 2.8e-07 58.9 96 38.5
Ciclev10015869m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.8e-07 58.9 86 40.7
DCAR_005092 Daucus carota HOM05D000264 ORTHO05D000152 3.6e-07 58.5 107 33.6
Sabra19G0137100 Salix brachista HOM05D000264 ORTHO05D000152 3.6e-07 58.5 90 43.3
GSVIVG01020877001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.6e-07 58.5 94 38.3
Ciclev10006968m.g Citrus clementina HOM05D000264 ORTHO05D000152 4.8e-07 58.2 85 43.5
Rhsim04G0191000 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.8e-07 58.2 102 38.2
Solyc07g061740.4 Solanum lycopersicum HOM05D000264 ORTHO05D000152 4.8e-07 58.2 111 36.9
Potri.019G107700 Populus trichocarpa HOM05D000264 ORTHO05D000152 6.2e-07 57.8 114 37.7
Sabra19G0071400 Salix brachista HOM05D000264 ORTHO05D000152 6.2e-07 57.8 94 41.5
CAN.G1173.7 Capsicum annuum HOM05D000264 ORTHO05D000152 8.1e-07 57.4 108 38.0
Nitab4.5_0000476g0180 Nicotiana tabacum HOM05D000264 ORTHO05D000152 8.1e-07 57.4 109 37.6
Potri.019G105900 Populus trichocarpa HOM05D000264 ORTHO05D000152 8.1e-07 57.4 113 36.3
Potri.019G107800 Populus trichocarpa HOM05D000264 ORTHO05D000152 8.1e-07 57.4 113 36.3
QL10p054050 Quercus lobata HOM05D000264 ORTHO05D000152 8.1e-07 57.4 97 33.0
RhsimUnG0174300 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.1e-07 57.4 95 38.9
Sabra19G0116700 Salix brachista HOM05D000264 ORTHO05D000152 1.1e-06 57.0 100 41.0
QL10p054118 Quercus lobata HOM05D000264 ORTHO05D000152 1.4e-06 56.6 101 36.6
DCAR_005158 Daucus carota HOM05D000264 ORTHO05D000152 1.8e-06 56.2 102 37.3
Duzib151G0730 Durio zibethinus HOM05D000264 ORTHO05D000152 1.8e-06 56.2 88 39.8
Lj3C731T3 Lonicera japonica HOM05D000264 ORTHO05D000152 1.8e-06 56.2 96 41.7
GSVIVG01027206001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.8e-06 56.2 95 34.7
Ciclev10006527m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.4e-06 55.8 96 34.4
Oeu032604.1 Olea europaea HOM05D000264 ORTHO05D000152 2.4e-06 55.8 98 35.7
Rhsim05G0056300 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.4e-06 55.8 102 41.2
Aqoxy4G01400 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 3.1e-06 55.5 95 42.1
Aqoxy4G02566 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 3.1e-06 55.5 89 39.3
Aqoxy4G02571 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 3.1e-06 55.5 94 41.5
Dinv06866 Davidia involucrata HOM05D000264 ORTHO05D000152 3.1e-06 55.5 108 38.0
QL10p054365 Quercus lobata HOM05D000264 ORTHO05D000152 3.1e-06 55.5 93 37.6
Sabra19G0115800 Salix brachista HOM05D000264 ORTHO05D000152 3.1e-06 55.5 89 43.8
DCAR_005160 Daucus carota HOM05D000264 ORTHO05D000152 4.0e-06 55.1 102 37.3
Dinv14029 Davidia involucrata HOM05D000264 ORTHO05D000152 4.0e-06 55.1 96 39.6
Hma1.2p1_1193F.1_g265650 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.0e-06 55.1 95 36.8
Nitab4.5_0002458g0120 Nicotiana tabacum HOM05D000264 ORTHO05D000152 4.0e-06 55.1 106 37.7
Peaxi162Scf00156g01113 Petunia axillaris HOM05D000264 ORTHO05D000152 4.0e-06 55.1 105 37.1
Solyc05g055970.4 Solanum lycopersicum HOM05D000264 ORTHO05D000152 4.0e-06 55.1 106 35.8
Aqoxy4G01192 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 5.3e-06 54.7 95 42.1
CAN.G449.42 Capsicum annuum HOM05D000264 ORTHO05D000152 5.3e-06 54.7 103 37.9
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.3e-06 54.7 108 35.2
COL.COLO4_10876 Corchorus olitorius HOM05D000264 ORTHO05D000152 5.3e-06 54.7 96 37.5
Lj3P792T16 Lonicera japonica HOM05D000264 ORTHO05D000152 5.3e-06 54.7 96 39.6
Potri.019G108200 Populus trichocarpa HOM05D000264 ORTHO05D000152 6.9e-06 54.3 101 36.6
Rhsim04G0191900 Rhododendron simsii HOM05D000264 ORTHO05D000152 6.9e-06 54.3 102 36.3
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 9.0e-06 53.9 95 35.8
Nitab4.5_0000850g0090 Nicotiana tabacum HOM05D000264 ORTHO05D000152 9.0e-06 53.9 103 37.9
PSO017G0678 Papaver somniferum HOM05D000264 ORTHO05D000152 9.0e-06 53.9 104 35.6
PSO017G5028 Papaver somniferum HOM05D000264 ORTHO05D000152 9.0e-06 53.9 103 37.9
Potri.019G109150 Populus trichocarpa HOM05D000264 ORTHO05D000152 9.0e-06 53.9 110 36.4
Sabra19G0115500 Salix brachista HOM05D000264 ORTHO05D000152 9.0e-06 53.9 96 39.6


User provided reference genes

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