Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P774T7 Lonicera japonica HOM05D033218 ORTHO05D015831 5.1e-50 200.7 95 100.0
Lj3P703T7 Lonicera japonica HOM05D033218 ORTHO05D015831 7.0e-15 84.0 55 76.4
Lj3P706T7 Lonicera japonica HOM05D000021 ORTHO05D015831 1.9e-12 75.9 67 59.7
Lj3P704T12 Lonicera japonica HOM05D000021 ORTHO05D000010 4.2e-12 74.7 54 70.4
Lj3P710T6 Lonicera japonica HOM05D000021 ORTHO05D000010 1.6e-11 72.8 38 89.5
MD07G1165000 Malus domestica HOM05D000021 ORTHO05D015831 1.7e-08 62.8 60 53.3
Migut.G01058 Erythranthe guttata HOM05D000021 ORTHO05D000010 2.2e-08 62.4 61 52.5
Cc00_g20840 Coffea canephora HOM05D000021 ORTHO05D000010 2.8e-08 62.0 91 38.5
Rhsim09G0176100 Rhododendron simsii HOM05D000021 ORTHO05D000010 2.8e-08 62.0 63 50.8
Ciclev10013349m.g Citrus clementina HOM05D000021 ORTHO05D000010 3.7e-08 61.6 96 39.6
Migut.G01066 Erythranthe guttata HOM05D000021 ORTHO05D000010 3.7e-08 61.6 64 48.4
Migut.G01090 Erythranthe guttata HOM05D000021 ORTHO05D000010 6.3e-08 60.8 64 48.4
Duzib151G0121 Durio zibethinus HOM05D000021 ORTHO05D000010 1.1e-07 60.1 54 55.6
Ciclev10033505m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.4e-07 57.8 62 46.8
Gorai.011G181600 Gossypium raimondii HOM05D000021 ORTHO05D000010 5.4e-07 57.8 81 40.7
Manes.07G070830 Manihot esculenta HOM05D000021 ORTHO05D000010 5.4e-07 57.8 47 59.6
Rhsim09G0176400 Rhododendron simsii HOM05D000021 ORTHO05D000010 7.0e-07 57.4 69 42.0
CiPaw.07G071200 Carya illinoinensis HOM05D000021 ORTHO05D000010 9.2e-07 57.0 59 52.5
Eucgr.C01565 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.2e-07 57.0 71 45.1
AUR62037251 Chenopodium quinoa HOM05D000021 ORTHO05D000010 1.2e-06 56.6 88 37.5
Medtr1g088940 Medicago truncatula HOM05D000021 ORTHO05D000010 1.6e-06 56.2 82 35.4
HanXRQChr07g0205301 Helianthus annuus HOM05D000021 ORTHO05D000010 2.0e-06 55.8 37 67.6
QL04p019886 Quercus lobata HOM05D000021 ORTHO05D000010 2.7e-06 55.5 64 43.8
QL04p020979 Quercus lobata HOM05D000021 ORTHO05D000010 2.7e-06 55.5 64 43.8
QL04p078730 Quercus lobata HOM05D000021 ORTHO05D000010 2.7e-06 55.5 64 43.8
RcHm_v2.0_Chr1g0335021 Rosa chinensis HOM05D000021 ORTHO05D000010 2.7e-06 55.5 100 36.0
CSS0035895 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.5e-06 55.1 55 47.3
Ciclev10013847m.g Citrus clementina HOM05D000021 ORTHO05D000010 3.5e-06 55.1 49 55.1
FAN06G0593 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.5e-06 54.7 71 40.8
CSS0017529 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 5.9e-06 54.3 54 50.0
Migut.G01056 Erythranthe guttata HOM05D000021 ORTHO05D000010 5.9e-06 54.3 64 45.3
MD03G1090600 Malus domestica HOM05D000021 ORTHO05D000010 5.9e-06 54.3 63 47.6
QL04p020713 Quercus lobata HOM05D000021 ORTHO05D000010 5.9e-06 54.3 64 43.8
vmacro10057 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 5.9e-06 54.3 62 45.2
MD13G1275400 Malus domestica HOM05D033218 ORTHO05D022857 7.8e-06 53.9 56 50.0


User provided reference genes

Program Settings