Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 9.3e-170 600.1 304 100.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.2e-139 499.2 304 81.9
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.9e-139 498.8 304 81.9
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.9e-139 498.8 304 81.9
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.4e-138 496.5 304 81.2
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 81.6
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.2e-138 495.4 304 81.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 4.2e-138 495.0 304 81.2
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 5.5e-138 494.6 304 81.2
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 9.4e-138 493.8 304 79.6
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.7e-137 492.3 304 80.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.7e-137 492.3 304 81.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.1e-137 491.1 302 80.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.9e-136 488.4 304 79.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 8.8e-136 487.3 304 79.6
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 79.6
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.0e-135 486.1 304 78.6
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 4.4e-135 485.0 304 78.6
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 9.7e-135 483.8 304 79.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.8e-133 479.6 304 78.3
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.8e-133 479.6 304 78.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 3.1e-133 478.8 297 80.1
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 3.1e-133 478.8 303 78.2
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 7.0e-133 477.6 304 79.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 7.0e-133 477.6 304 78.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.5e-132 476.5 304 78.0
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.5e-132 476.5 304 78.6
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 78.6
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 78.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 78.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 77.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 6.5e-131 471.1 302 75.8
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 8.5e-131 470.7 304 76.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.1e-130 470.3 304 76.6
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.5e-130 469.9 304 78.0
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 5.5e-130 468.0 304 76.3
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 7.2e-130 467.6 304 78.0
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.6e-129 466.5 304 75.0
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.1e-129 466.1 304 76.6
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 2.7e-129 465.7 304 75.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 2.7e-129 465.7 304 77.3
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.6e-129 465.3 304 77.0
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 75.7
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 76.6
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 8.0e-129 464.2 304 75.7
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 8.0e-129 464.2 304 75.7
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.9e-128 461.8 304 75.7
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 6.7e-128 461.1 304 76.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.6e-127 459.1 300 76.0
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.3e-127 458.8 305 76.4
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 3.3e-127 458.8 304 75.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.4e-127 458.4 304 76.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 4.4e-127 458.4 300 76.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 4.4e-127 458.4 304 74.7
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 5.7e-127 458.0 304 74.0
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 7.4e-127 457.6 304 76.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 74.3
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.8e-126 455.7 306 73.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.8e-126 455.7 306 73.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.8e-126 455.7 306 73.2
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 3.7e-126 455.3 304 76.3
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 6.3e-126 454.5 306 72.9
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 6.3e-126 454.5 304 73.7
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 75.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.1e-125 453.8 304 73.7
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 72.5
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 72.2
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.4e-125 452.6 304 74.7
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 3.1e-125 452.2 300 76.7
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 3.1e-125 452.2 306 73.5
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 9.1e-125 450.7 304 75.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.2e-124 450.3 306 73.2
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.6e-124 449.9 304 73.0
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.0e-124 449.5 306 74.5
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.0e-124 449.5 304 74.0
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.3e-123 446.8 306 73.5
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.9e-123 445.7 306 74.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 8.5e-123 444.1 306 72.9
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.5e-122 443.4 306 73.9
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 9.4e-122 440.7 300 74.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 8.0e-121 437.6 284 77.8
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.4e-120 436.8 283 78.1
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 4.2e-114 415.2 301 68.4
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 9.4e-114 414.1 262 79.4
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 2.1e-113 412.9 301 67.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 3.6e-113 412.1 301 71.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.2e-111 407.1 301 66.4
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.8e-110 402.5 304 67.1
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 8.3e-110 401.0 301 66.8
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 2.7e-108 396.0 247 81.8
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.3e-107 392.9 286 69.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 5.2e-104 381.7 266 73.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 4.9e-102 375.2 242 75.2
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 5.2e-96 355.1 304 58.9
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.1e-93 347.4 230 74.8
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 4.1e-93 345.5 295 64.1
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.3e-90 335.9 265 64.5
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.0e-87 326.6 256 65.2
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.4e-87 325.5 288 57.3
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 3.7e-86 322.4 301 54.8
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-83 313.9 196 80.1
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.3e-83 313.9 300 54.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 6.6e-83 311.6 220 71.4
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.6e-76 288.9 304 53.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 7.8e-76 288.1 297 53.2
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 5.6e-74 282.0 196 68.9
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 5.3e-64 248.8 313 45.0
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.4e-63 246.1 215 61.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.9e-54 216.5 144 78.5
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 2.4e-53 213.4 303 44.9
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.3e-53 211.5 143 76.9
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-52 210.3 144 76.4
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.5e-47 194.1 316 40.5
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.2e-45 186.4 144 71.5
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 6.2e-41 172.2 164 48.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.4e-40 171.0 123 69.1
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-39 167.9 91 87.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 6.5e-38 162.2 365 32.6
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 3.0e-35 153.3 314 34.7
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.8e-33 146.7 265 40.8
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.6e-28 129.8 339 30.4
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 7.4e-26 122.1 80 73.8
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 7.7e-15 85.5 43 90.7


User provided reference genes

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