Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P688T3 Lonicera japonica HOM05D000011 ORTHO05D019263 1.2e-61 239.6 116 100.0
Lj3P689T5 Lonicera japonica HOM05D011307 ORTHO05D019263 1.3e-31 139.8 104 67.3
Lj3P682T4 Lonicera japonica HOM05D000011 ORTHO05D019263 3.8e-15 85.1 103 42.7
Lj3P678T10 Lonicera japonica HOM05D000011 ORTHO05D019263 6.5e-15 84.3 103 42.7
Lj3P678T7 Lonicera japonica HOM05D000011 ORTHO05D019263 4.2e-14 81.6 105 41.0
Hma1.2p1_0112F.1_g054350 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 5.2e-12 74.7 108 44.4
Hma1.2p1_0112F.1_g054630 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 5.7e-11 71.2 107 43.9
Lj3C665T4 Lonicera japonica HOM05D000011 ORTHO05D019263 7.5e-11 70.9 102 43.1
Oeu016775.1 Olea europaea HOM05D000011 ORTHO05D000018 9.8e-11 70.5 101 44.6
MSTRG.21985 Avicennia marina HOM05D000011 ORTHO05D000018 1.3e-10 70.1 101 42.6
Migut.F01425 Erythranthe guttata HOM05D000011 ORTHO05D000018 1.7e-10 69.7 102 44.1
Oeu035001.2 Olea europaea HOM05D000011 ORTHO05D000018 2.8e-10 68.9 104 44.2
Hma1.2p1_0042F.1_g025760 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.4e-09 65.9 100 44.0
Hma1.2p1_0385F.1_g141290 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.4e-09 65.9 117 41.9
Hma1.2p1_2189F.1_g316580 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.4e-09 65.9 117 41.9
DCAR_028763 Daucus carota HOM05D000011 ORTHO05D000018 5.4e-09 64.7 96 39.6
Dinv27077 Davidia involucrata HOM05D000011 ORTHO05D000018 9.1e-09 63.9 101 44.6
DCAR_004853 Daucus carota HOM05D000011 ORTHO05D000018 1.2e-08 63.5 111 37.8
Cc03_g06200 Coffea canephora HOM05D000011 ORTHO05D000018 1.6e-08 63.2 100 40.0
Hma1.2p1_0383F.1_g140430 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.6e-08 63.2 103 38.8
Lj3P668T4 Lonicera japonica HOM05D000011 ORTHO05D000018 2.0e-08 62.8 102 39.2
Dinv27079 Davidia involucrata HOM05D000011 ORTHO05D000018 2.7e-08 62.4 111 36.9
Lj6C340T1 Lonicera japonica HOM05D011307 ORTHO05D019263 5.9e-08 61.2 100 43.0
DCAR_004973 Daucus carota HOM05D000011 ORTHO05D000018 7.7e-08 60.8 105 35.2
Hma1.2p1_0267F.1_g107160 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 7.7e-08 60.8 101 42.6
DCAR_004976 Daucus carota HOM05D000011 ORTHO05D000018 1.7e-07 59.7 105 37.1
DCAR_004880 Daucus carota HOM05D000011 ORTHO05D000018 2.3e-07 59.3 108 35.2
Hma1.2p1_0385F.1_g141340 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.3e-07 59.3 103 38.8
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 2.9e-07 58.9 100 36.0
DCAR_004978 Daucus carota HOM05D000011 ORTHO05D000018 2.9e-07 58.9 105 35.2
DCAR_004975 Daucus carota HOM05D000011 ORTHO05D000018 3.8e-07 58.5 100 34.0
Hma1.2p1_0385F.1_g141350 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 3.8e-07 58.5 99 42.4
Hma1.2p1_0385F.1_g141410 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 3.8e-07 58.5 99 42.4
DCAR_004987 Daucus carota HOM05D000011 ORTHO05D000018 5.0e-07 58.2 103 35.0
Hma1.2p1_0267F.1_g107090 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 5.0e-07 58.2 99 38.4
Oeu026614.3 Olea europaea HOM05D000011 ORTHO05D011387 5.0e-07 58.2 104 41.3
DCAR_004952 Daucus carota HOM05D000011 ORTHO05D000018 6.6e-07 57.8 110 34.5
Hma1.2p1_0385F.1_g141370 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 6.6e-07 57.8 106 38.7
CSS0032454 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 8.6e-07 57.4 101 42.6
Actinidia39851 Actinidia chinensis HOM05D000011 ORTHO05D000018 1.1e-06 57.0 103 35.9
Cc03_g06210 Coffea canephora HOM05D000011 ORTHO05D000018 1.1e-06 57.0 100 38.0
DCAR_004971 Daucus carota HOM05D000011 ORTHO05D000018 1.1e-06 57.0 105 35.2
Cc03_g06190 Coffea canephora HOM05D000011 ORTHO05D000018 1.5e-06 56.6 101 37.6
Duzib138G0602 Durio zibethinus HOM05D000011 ORTHO05D000018 1.9e-06 56.2 113 36.3
Migut.G00482 Erythranthe guttata HOM05D000011 ORTHO05D000018 1.9e-06 56.2 103 36.9
Actinidia39853 Actinidia chinensis HOM05D000011 ORTHO05D000018 2.5e-06 55.8 103 36.9
DCAR_004842 Daucus carota HOM05D000011 ORTHO05D000018 2.5e-06 55.8 110 35.5
DCAR_004980 Daucus carota HOM05D000011 ORTHO05D000018 3.3e-06 55.5 100 36.0
Migut.G00480 Erythranthe guttata HOM05D000011 ORTHO05D011387 3.3e-06 55.5 102 36.3
MD04G1238000 Malus domestica HOM05D000011 ORTHO05D000018 3.3e-06 55.5 100 36.0
Nitab4.5_0003268g0040 Nicotiana tabacum HOM05D000011 ORTHO05D011387 3.3e-06 55.5 101 35.6
DCAR_004970 Daucus carota HOM05D000011 ORTHO05D000018 5.5e-06 54.7 108 34.3
Dinv27082 Davidia involucrata HOM05D002618 ORTHO05D002753 5.5e-06 54.7 95 38.9
COL.COLO4_08983 Corchorus olitorius HOM05D000011 ORTHO05D000018 7.2e-06 54.3 103 35.0
Hma1.2p1_0383F.1_g140470 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 7.2e-06 54.3 103 35.9
Lj1g0009587 Lotus japonicus HOM05D000011 ORTHO05D000018 7.2e-06 54.3 100 34.0
MD12G1256300 Malus domestica HOM05D000011 ORTHO05D000018 7.2e-06 54.3 100 34.0
Oeu026613.2 Olea europaea HOM05D000011 ORTHO05D011387 7.2e-06 54.3 105 38.1
CSS0049982 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 9.5e-06 53.9 104 36.5
DCAR_004876 Daucus carota HOM05D000011 ORTHO05D000018 9.5e-06 53.9 109 30.3
Gorai.007G175800 Gossypium raimondii HOM05D000011 ORTHO05D000018 9.5e-06 53.9 102 37.3


User provided reference genes

Program Settings