Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P588T9 Lonicera japonica HOM05D008785 ORTHO05D010769 1.4e-99 366.3 194 100.0
Lj3P596T12 Lonicera japonica HOM05D008785 ORTHO05D010769 2.0e-56 223.0 195 62.1
Lj3P683T4 Lonicera japonica HOM05D008785 ORTHO05D010769 2.2e-55 219.5 189 70.4
Lju414C6T2 Lonicera japonica HOM05D008785 ORTHO05D010769 5.9e-53 211.5 197 62.4
Lj3C591T10 Lonicera japonica HOM05D008785 ORTHO05D010769 6.8e-49 198.0 193 59.1
Lj3C591T11 Lonicera japonica HOM05D008785 ORTHO05D010769 9.2e-46 187.6 193 62.7
Lj3C595T0 Lonicera japonica HOM05D008785 ORTHO05D010769 1.2e-45 187.2 200 60.5
Lj3C587T0 Lonicera japonica HOM05D008785 ORTHO05D010769 3.5e-45 185.7 193 62.2
Lj3C586T4 Lonicera japonica HOM05D008785 ORTHO05D010769 7.8e-45 184.5 188 60.6
Lj3C589T0 Lonicera japonica HOM05D008785 ORTHO05D010769 5.6e-43 178.3 196 57.7
Lj3C590T2 Lonicera japonica HOM05D008785 ORTHO05D010769 5.6e-35 151.8 178 56.7
Lj3C590T5 Lonicera japonica HOM05D008785 ORTHO05D010769 6.8e-33 144.8 173 51.4
Lju414C6G4 Lonicera japonica HOM05D008785 ORTHO05D010769 1.4e-30 137.1 129 54.3
Lj3C595T2 Lonicera japonica HOM05D008785 ORTHO05D010769 2.1e-29 133.3 173 49.1
Lju414C6T6 Lonicera japonica HOM05D008785 ORTHO05D010769 6.6e-28 128.3 155 58.1
Lj3P595T12 Lonicera japonica HOM05D008785 ORTHO05D010769 9.9e-24 114.4 104 56.7
Lj3A591T25 Lonicera japonica HOM05D008785 ORTHO05D010769 6.4e-23 111.7 182 41.2
Lj3P587T10 Lonicera japonica HOM05D008785 ORTHO05D010769 8.4e-23 111.3 104 54.8
Lj3P592T11 Lonicera japonica HOM05D008785 ORTHO05D010769 8.4e-23 111.3 104 54.8
Lj3C593G5 Lonicera japonica HOM05D008785 ORTHO05D010769 1.1e-22 110.9 104 54.8
Lj3C596T8 Lonicera japonica HOM05D008785 ORTHO05D010769 5.4e-22 108.6 167 41.3
Lj3C590T1 Lonicera japonica HOM05D008785 ORTHO05D010769 8.6e-20 101.3 106 47.2
Lj3C588G7 Lonicera japonica HOM05D008785 ORTHO05D010769 1.1e-19 100.9 169 40.2
Lj3C593T8 Lonicera japonica HOM05D008785 ORTHO05D010769 1.1e-19 100.9 92 73.9
Lj3A587T15 Lonicera japonica HOM05D008785 ORTHO05D010769 1.4e-17 94.0 119 47.9
Lj3A592T20 Lonicera japonica HOM05D008785 ORTHO05D010769 4.0e-17 92.4 119 47.1
Lj8A316G23 Lonicera japonica HOM05D009617 ORTHO05D010313 3.3e-11 72.8 198 27.8
Lj8C312T5 Lonicera japonica HOM05D009617 ORTHO05D010313 2.1e-10 70.1 198 27.3
Lj3C593T7 Lonicera japonica HOM05D008785 ORTHO05D010769 6.2e-10 68.6 100 44.0
Lju414C6T4 Lonicera japonica HOM05D008785 ORTHO05D010769 2.0e-08 63.5 81 48.1
RcHm_v2.0_Chr4g0445031 Rosa chinensis HOM05D000005 ORTHO05D000012 2.0e-08 63.5 86 37.2
RcHm_v2.0_Chr4g0445061 Rosa chinensis HOM05D000005 ORTHO05D000012 2.0e-08 63.5 86 37.2
Dinv25477 Davidia involucrata HOM05D000005 ORTHO05D000012 4.5e-08 62.4 83 37.3
Manes.09G158500 Manihot esculenta HOM05D000005 ORTHO05D000012 1.7e-07 60.5 93 34.4
QL05p079585 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-07 60.5 76 43.4
QL93p2016_0075 Quercus lobata HOM05D000005 ORTHO05D000012 2.2e-07 60.1 103 35.9
Lj8A315G24 Lonicera japonica HOM05D009617 ORTHO05D010313 3.8e-07 59.3 95 34.7
PGR102G1004 Punica granatum HOM05D000005 ORTHO05D000012 3.8e-07 59.3 128 30.5
QL09p043498 Quercus lobata HOM05D000005 ORTHO05D000012 3.8e-07 59.3 81 43.2
FvH4_4g35430 Fragaria vesca HOM05D000005 ORTHO05D000012 6.4e-07 58.5 62 43.5
Duzib212G0923 Durio zibethinus HOM05D000005 ORTHO05D000012 8.4e-07 58.2 86 37.2
Nn7g36991 Nelumbo nucifera HOM05D000005 ORTHO05D000012 8.4e-07 58.2 133 30.8
PGR102G0476 Punica granatum HOM05D000005 ORTHO05D000012 8.4e-07 58.2 128 30.5
MD05G1018900 Malus domestica HOM05D000005 ORTHO05D000012 1.1e-06 57.8 85 41.2
TWI36G1442 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 1.1e-06 57.8 102 33.3
Duzib212G0136 Durio zibethinus HOM05D000005 ORTHO05D000012 1.4e-06 57.4 86 37.2
FAN17G0480 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.4e-06 57.4 62 41.9
MD10G1018900 Malus domestica HOM05D000005 ORTHO05D000012 1.4e-06 57.4 84 40.5
QL04p087751 Quercus lobata HOM05D000005 ORTHO05D000012 1.4e-06 57.4 79 41.8
Potri.012G053200 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-06 57.0 86 32.6
QL04p087870 Quercus lobata HOM05D000005 ORTHO05D000012 1.9e-06 57.0 79 40.5
TPR.G32733 Trifolium pratense HOM05D000005 ORTHO05D000012 1.9e-06 57.0 43 58.1
Eucgr.H01423 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.4e-06 56.6 71 40.8
Potri.019G007884 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.4e-06 56.6 103 35.0
Lj3C592T4 Lonicera japonica HOM05D008785 ORTHO05D010769 3.2e-06 56.2 133 33.1
Lj3P593T18 Lonicera japonica HOM05D008785 ORTHO05D010769 3.2e-06 56.2 31 83.9
Lju414P6T35 Lonicera japonica HOM05D008785 ORTHO05D010769 3.2e-06 56.2 31 83.9
Lju414P6T40 Lonicera japonica HOM05D008785 ORTHO05D010769 3.2e-06 56.2 31 83.9
GSVIVG01005729001 Vitis vinifera HOM05D000005 ORTHO05D001748 3.2e-06 56.2 89 37.1
Lj3P592T12 Lonicera japonica HOM05D008785 ORTHO05D010769 4.2e-06 55.8 31 83.9
GSVIVG01001801001 Vitis vinifera HOM05D000005 ORTHO05D001748 4.2e-06 55.8 89 37.1
COL.COLO4_10633 Corchorus olitorius HOM05D000005 ORTHO05D000012 5.4e-06 55.5 71 39.4
Dinv12508 Davidia involucrata HOM05D000005 ORTHO05D000012 5.4e-06 55.5 71 39.4
Thhalv10010076m.g Eutrema salsugineum HOM05D000005 ORTHO05D000012 5.4e-06 55.5 74 43.2
FAN19G2664 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.4e-06 55.5 76 46.1
MD10G1015300 Malus domestica HOM05D000005 ORTHO05D000012 5.4e-06 55.5 84 40.5
MD15G1375000 Malus domestica HOM05D000005 ORTHO05D000012 5.4e-06 55.5 87 36.8
GSVIVG01005725001 Vitis vinifera HOM05D000005 ORTHO05D001748 5.4e-06 55.5 81 38.3
Lj3C593G8 Lonicera japonica HOM05D008785 ORTHO05D010769 7.1e-06 55.1 39 64.1
SEGI_35548 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 7.1e-06 55.1 119 30.3
TPR.G21428 Trifolium pratense HOM05D000005 ORTHO05D000012 7.1e-06 55.1 66 47.0
BolC1t05785H Brassica oleracea HOM05D000005 ORTHO05D000449 9.3e-06 54.7 67 40.3
MELO3C030973.2 Cucumis melo HOM05D000005 ORTHO05D000012 9.3e-06 54.7 58 44.8
Dinv32052 Davidia involucrata HOM05D000005 ORTHO05D000012 9.3e-06 54.7 81 33.3
Lj8C311T2 Lonicera japonica HOM05D009617 ORTHO05D010313 9.3e-06 54.7 187 26.2
Nn1g03670 Nelumbo nucifera HOM05D000005 ORTHO05D010769 9.3e-06 54.7 55 43.6
Prupe.8G046500 Prunus persica HOM05D000005 ORTHO05D000012 9.3e-06 54.7 74 44.6


User provided reference genes

Program Settings