Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P548T43 Lonicera japonica HOM05D000007 ORTHO05D018014 1.6e-67 259.2 128 100.0
Lj3C538T6 Lonicera japonica HOM05D000007 ORTHO05D018014 3.1e-18 95.5 56 83.9
Lj3A548T46 Lonicera japonica HOM05D000007 ORTHO05D018014 3.5e-17 92.0 68 69.1
Lj3P550T42 Lonicera japonica HOM05D000007 ORTHO05D000017 2.5e-15 85.9 63 61.9
Lj3P550T16 Lonicera japonica HOM05D000007 ORTHO05D000017 5.5e-15 84.7 77 57.1
Lj3P553T4 Lonicera japonica HOM05D000007 ORTHO05D000017 1.2e-14 83.6 69 60.9
Lj3P552T19 Lonicera japonica HOM05D000007 ORTHO05D000017 1.8e-13 79.7 69 59.4
Lj3P537T56 Lonicera japonica HOM05D000007 ORTHO05D018014 2.8e-11 72.4 48 75.0
Nitab4.5_0000960g0220 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.8e-10 69.7 65 49.2
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 3.1e-10 68.9 64 51.6
Nitab4.5_0000191g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.1e-10 68.9 65 47.7
DCAR_026597 Daucus carota HOM05D000007 ORTHO05D000017 7.0e-10 67.8 63 47.6
Lsat_1_v5_gn_6_61400 Lactuca sativa HOM05D000007 ORTHO05D000017 1.2e-09 67.0 64 48.4
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 2.0e-09 66.2 76 46.1
Sabra08G0161100 Salix brachista HOM05D000007 ORTHO05D000017 2.7e-09 65.9 63 50.8
Potri.008G199800 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.5e-09 65.5 63 49.2
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 4.5e-09 65.1 64 50.0
Lj3P539T30 Lonicera japonica HOM05D000007 ORTHO05D018014 4.5e-09 65.1 48 70.8
Solyc09g091710.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 4.5e-09 65.1 75 44.0
Sopen09g034610 Solanum pennellii HOM05D000007 ORTHO05D000017 5.9e-09 64.7 75 42.7
PGSC0003DMG400029655 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.9e-09 64.7 75 42.7
Lsat_1_v5_gn_6_61500 Lactuca sativa HOM05D000007 ORTHO05D000017 7.7e-09 64.3 64 48.4
HanXRQChr07g0185881 Helianthus annuus HOM05D000007 ORTHO05D000017 2.2e-08 62.8 68 45.6
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 3.8e-08 62.0 64 46.9
Duzib212G0784 Durio zibethinus HOM05D000007 ORTHO05D000017 1.1e-07 60.5 66 47.0
CAN.G500.31 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-07 60.1 76 44.7
PGSC0003DMG403021681 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-07 59.7 64 48.4
CSS0004500 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.5e-07 59.3 68 45.6
CSS0046565 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.5e-07 59.3 68 45.6
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 3.2e-07 58.9 63 44.4
vmacro00490 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.4e-07 57.4 71 39.4
Sopen10g004270 Solanum pennellii HOM05D000007 ORTHO05D000017 1.2e-06 57.0 64 46.9
Dinv11913 Davidia involucrata HOM05D000007 ORTHO05D000017 1.6e-06 56.6 64 45.3
Nitab4.5_0001611g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.6e-06 56.6 62 43.5
Solyc10g008450.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.1e-06 56.2 64 46.9
Gohir.A09G200800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.7e-06 55.8 57 49.1
Gohir.D09G195001 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.7e-06 55.8 57 49.1
Gorai.006G218400 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.7e-06 55.8 57 49.1
Gorai.006G218500 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.7e-06 55.8 64 43.8
Peaxi162Scf01070g00125 Petunia axillaris HOM05D000007 ORTHO05D000017 2.7e-06 55.8 64 50.0
Gohir.D09G195100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 3.6e-06 55.5 64 43.8
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 3.6e-06 55.5 60 45.0
Aqoxy5G02264 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 6.1e-06 54.7 73 41.1
CAN.G1437.10 Capsicum annuum HOM05D000007 ORTHO05D000017 8.0e-06 54.3 73 41.1
COL.COLO4_21619 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.0e-06 54.3 77 40.3
Gohir.A09G200901 Gossypium hirsutum HOM05D000007 ORTHO05D000017 8.0e-06 54.3 97 38.1
Nitab4.5_0000635g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.0e-06 54.3 64 45.3


User provided reference genes

Program Settings