Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P539T30 Lonicera japonica HOM05D000007 ORTHO05D018014 2.2e-66 255.4 120 100.0
Lj3C538T6 Lonicera japonica HOM05D000007 ORTHO05D018014 9.7e-38 160.2 92 81.5
Lj3A548T46 Lonicera japonica HOM05D000007 ORTHO05D018014 3.2e-33 145.2 92 71.7
Lj3P537T56 Lonicera japonica HOM05D000007 ORTHO05D018014 3.7e-29 131.7 91 70.3
Lj3P550T16 Lonicera japonica HOM05D000007 ORTHO05D000017 4.2e-25 118.2 83 65.1
Lj3P552T19 Lonicera japonica HOM05D000007 ORTHO05D000017 4.2e-25 118.2 83 65.1
Lj3P550T42 Lonicera japonica HOM05D000007 ORTHO05D000017 7.2e-25 117.5 92 55.4
Lj3P553T4 Lonicera japonica HOM05D000007 ORTHO05D000017 1.0e-23 113.6 83 62.7
DCAR_026597 Daucus carota HOM05D000007 ORTHO05D000017 3.0e-15 85.5 83 42.2
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 2.6e-14 82.4 82 46.3
Lsat_1_v5_gn_6_61500 Lactuca sativa HOM05D000007 ORTHO05D000017 9.8e-14 80.5 88 43.2
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 3.7e-13 78.6 88 42.0
Manes.15G021100 Manihot esculenta HOM05D000007 ORTHO05D000017 1.4e-12 76.6 81 42.0
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 2.4e-12 75.9 81 43.2
Lsat_1_v5_gn_6_61400 Lactuca sativa HOM05D000007 ORTHO05D000017 3.1e-12 75.5 87 37.9
HanXRQChr07g0185881 Helianthus annuus HOM05D000007 ORTHO05D000017 2.7e-11 72.4 88 39.8
CAN.G500.31 Capsicum annuum HOM05D000007 ORTHO05D000017 5.9e-11 71.2 88 43.2
Nitab4.5_0002978g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.7e-11 70.9 93 37.6
Nitab4.5_0000191g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.0e-10 70.5 92 38.0
Sabra08G0161100 Salix brachista HOM05D000007 ORTHO05D000017 1.0e-10 70.5 81 42.0
Solyc09g091710.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.0e-10 70.5 92 40.2
PGSC0003DMG400029655 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-10 70.5 92 40.2
PGSC0003DMG400006107 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-10 70.1 84 39.3
Nitab4.5_0002171g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-10 69.7 92 40.2
Peaxi162Scf00246g00812 Petunia axillaris HOM05D000007 ORTHO05D000017 1.7e-10 69.7 84 44.0
Sopen09g034610 Solanum pennellii HOM05D000007 ORTHO05D000017 1.7e-10 69.7 92 40.2
vmacro15517 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.3e-10 69.3 95 32.6
vmacro00490 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.9e-10 68.9 84 40.5
Potri.008G199800 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.8e-10 68.6 81 40.7
Peaxi162Scf00246g00811 Petunia axillaris HOM05D000007 ORTHO05D000017 6.6e-10 67.8 79 44.3
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 8.6e-10 67.4 77 42.9
Migut.F01808 Erythranthe guttata HOM05D000007 ORTHO05D000017 8.6e-10 67.4 79 39.2
Lj3P548T43 Lonicera japonica HOM05D000007 ORTHO05D018014 8.6e-10 67.4 48 70.8
Nitab4.5_0000960g0220 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.5e-09 65.9 78 42.3
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 2.5e-09 65.9 78 41.0
PGSC0003DMG400031292 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-09 65.9 92 35.9
TPR.G18045 Trifolium pratense HOM05D000007 ORTHO05D000017 2.5e-09 65.9 81 39.5
Migut.F01803 Erythranthe guttata HOM05D000007 ORTHO05D000017 3.3e-09 65.5 80 40.0
Solyc09g083230.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.3e-09 65.5 81 40.7
Sopen09g032150 Solanum pennellii HOM05D000007 ORTHO05D000017 3.3e-09 65.5 81 40.7
Sopen09g032160 Solanum pennellii HOM05D000007 ORTHO05D000017 3.3e-09 65.5 81 40.7
Medtr2g021150 Medicago truncatula HOM05D000007 ORTHO05D000017 4.2e-09 65.1 81 39.5
Nitab4.5_0006812g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.2e-09 65.1 84 36.9
Psat1g185120 Pisum sativum HOM05D000007 ORTHO05D000017 7.2e-09 64.3 81 38.3
unitig_27.g25225 Utricularia gibba HOM05D000007 ORTHO05D000017 7.2e-09 64.3 81 39.5
Migut.F01806 Erythranthe guttata HOM05D000007 ORTHO05D000017 9.5e-09 63.9 82 40.2
Hma1.2p1_0187F.1_g081920 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 9.5e-09 63.9 90 37.8
vmacro19993 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.2e-08 63.5 80 36.2
COL.COLO4_21619 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.6e-08 63.2 86 41.9
Peaxi162Scf00421g00021 Petunia axillaris HOM05D000007 ORTHO05D000017 1.6e-08 63.2 104 33.7
Nitab4.5_0000122g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.1e-08 62.8 84 42.9
Migut.F01807 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.8e-08 62.4 83 38.6
Nitab4.5_0002182g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-08 62.4 82 36.6
Prupe.3G191300 Prunus persica HOM05D000007 ORTHO05D000017 2.8e-08 62.4 90 31.1
SalBow1G1717 Salvia bowleyana HOM05D000007 ORTHO05D018014 2.8e-08 62.4 84 36.9
Ca_00599_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 3.6e-08 62.0 84 34.5
Peaxi162Scf00421g00006 Petunia axillaris HOM05D000007 ORTHO05D000017 3.6e-08 62.0 81 39.5
Peaxi162Scf00421g00008 Petunia axillaris HOM05D000007 ORTHO05D000017 3.6e-08 62.0 87 39.1
Lalb_Chr20g0118311 Lupinus albus HOM05D000007 ORTHO05D000017 4.7e-08 61.6 84 35.7
Peaxi162Scf01604g00123 Petunia axillaris HOM05D000007 ORTHO05D000017 6.1e-08 61.2 79 39.2
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 6.1e-08 61.2 96 38.5
Peaxi162Scf00421g00007 Petunia axillaris HOM05D000007 ORTHO05D000017 8.0e-08 60.8 90 34.4
CAN.G1039.2 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-07 60.5 80 35.0
ECA240G1350 Erigeron canadensis HOM05D000007 ORTHO05D000017 1.0e-07 60.5 84 33.3
Nitab4.5_0000191g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.0e-07 60.5 85 37.6
Nitab4.5_0001611g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.0e-07 60.5 81 35.8
Glyma.15G101600 Glycine max HOM05D000007 ORTHO05D000017 1.4e-07 60.1 84 34.5
Nitab4.5_0001433g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-07 60.1 84 42.9
Nitab4.5_0007614g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-07 60.1 84 42.9
Peaxi162Scf00025g00321 Petunia axillaris HOM05D000007 ORTHO05D000017 1.4e-07 60.1 102 31.4
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 1.8e-07 59.7 84 32.1
Peaxi162Scf01070g00125 Petunia axillaris HOM05D000007 ORTHO05D000017 1.8e-07 59.7 78 41.0
Gorai.006G218500 Gossypium raimondii HOM05D000007 ORTHO05D000017 3.0e-07 58.9 83 36.1
Gohir.D09G195100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.0e-07 58.5 83 36.1
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 4.0e-07 58.5 81 33.3
Peaxi162Scf00526g00073 Petunia axillaris HOM05D000007 ORTHO05D000017 4.0e-07 58.5 84 33.3
VMungo0540G1914 Vigna mungo HOM05D000007 ORTHO05D000017 4.0e-07 58.5 84 32.1
Dinv38188 Davidia involucrata HOM05D000007 ORTHO05D000017 5.2e-07 58.2 102 27.5
Migut.N00720 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.2e-07 58.2 85 32.9
Gohir.A09G200800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.8e-07 57.8 85 35.3
Gohir.D09G195001 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.8e-07 57.8 85 35.3
Gorai.006G218400 Gossypium raimondii HOM05D000007 ORTHO05D000017 6.8e-07 57.8 85 35.3
COL.COLO4_13989 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.9e-07 57.4 85 38.8
Peaxi162Scf00039g00131 Petunia axillaris HOM05D000007 ORTHO05D000017 8.9e-07 57.4 81 34.6
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 8.9e-07 57.4 84 33.3
CAN.G500.20 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 93 32.3
Migut.C00415 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.2e-06 57.0 85 34.1
Migut.N00719 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.2e-06 57.0 85 34.1
Nitab4.5_0014315g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-06 56.6 82 37.8
Peaxi162Scf00047g00814 Petunia axillaris HOM05D000007 ORTHO05D000017 1.5e-06 56.6 101 31.7
Psat6g108160 Pisum sativum HOM05D000007 ORTHO05D000017 1.5e-06 56.6 82 32.9
SalBow1G8211 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.5e-06 56.6 84 34.5
vmacro18930 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.5e-06 56.6 91 33.0
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 2.0e-06 56.2 84 32.1
Medtr3g023940 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-06 56.2 81 32.1
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.6e-06 55.8 81 34.6
Rhsim04G0210300 Rhododendron simsii HOM05D000007 ORTHO05D013331 2.6e-06 55.8 83 32.5
Cc03_g07530 Coffea canephora HOM05D000007 ORTHO05D000017 3.4e-06 55.5 85 36.5
Migut.F01805 Erythranthe guttata HOM05D000007 ORTHO05D000017 3.4e-06 55.5 85 32.9
CAN.G1588.8 Capsicum annuum HOM05D000007 ORTHO05D000017 4.4e-06 55.1 83 31.3
CAN.G875.3 Capsicum annuum HOM05D000007 ORTHO05D000017 4.4e-06 55.1 83 34.9
Ca_00600_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 4.4e-06 55.1 81 33.3
Duzib151G0963 Durio zibethinus HOM05D000007 ORTHO05D000017 4.4e-06 55.1 84 38.1
Lalb_Chr18g0055981 Lupinus albus HOM05D000007 ORTHO05D000017 4.4e-06 55.1 81 33.3
GSVIVG01026027001 Vitis vinifera HOM05D000007 ORTHO05D000017 4.4e-06 55.1 84 29.8
Duzib212G0784 Durio zibethinus HOM05D000007 ORTHO05D000017 5.7e-06 54.7 44 59.1
Glyma.19G048100 Glycine max HOM05D000007 ORTHO05D000017 5.7e-06 54.7 87 39.1
Glyma.19G048200 Glycine max HOM05D000007 ORTHO05D000017 5.7e-06 54.7 87 39.1
Glyma.19G048300 Glycine max HOM05D000007 ORTHO05D000017 5.7e-06 54.7 87 39.1
SGA_v2.0_scaffold59G20641 Striga asiatica HOM05D000007 ORTHO05D000017 5.7e-06 54.7 79 32.9
Actinidia36943 Actinidia chinensis HOM05D000007 ORTHO05D000017 7.5e-06 54.3 81 32.1
Peaxi162Scf00912g00112 Petunia axillaris HOM05D000007 ORTHO05D000017 7.5e-06 54.3 85 35.3
RcHm_v2.0_Chr5g0060711 Rosa chinensis HOM05D000007 ORTHO05D000017 7.5e-06 54.3 86 37.2
PGSC0003DMG400006090 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.5e-06 54.3 81 35.8
arahy.Tifrunner.gnm1.ann1.AP71S7 Arachis hypogaea HOM05D000007 ORTHO05D000017 9.8e-06 53.9 84 31.0
arahy.Tifrunner.gnm1.ann1.SE5UPX Arachis hypogaea HOM05D000007 ORTHO05D000017 9.8e-06 53.9 84 31.0
CAN.G1096.1 Capsicum annuum HOM05D000007 ORTHO05D000017 9.8e-06 53.9 86 37.2
Migut.N00589 Erythranthe guttata HOM05D000007 ORTHO05D000017 9.8e-06 53.9 82 34.1
Medtr2g021190 Medicago truncatula HOM05D000007 ORTHO05D000017 9.8e-06 53.9 81 32.1
Nitab4.5_0004974g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.8e-06 53.9 92 32.6
Peaxi162Scf00039g01321 Petunia axillaris HOM05D000007 ORTHO05D000017 9.8e-06 53.9 83 33.7
Solyc09g091690.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.8e-06 53.9 85 35.3


User provided reference genes

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