Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P533T26 Lonicera japonica HOM05D021412 ORTHO05D025757 4.9e-47 190.7 87 100.0
Lj5C785T7 Lonicera japonica HOM05D008418 ORTHO05D000004 9.9e-16 86.7 84 42.9
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 1.7e-15 85.9 81 45.7
Lj8P177T18 Lonicera japonica HOM05D014440 ORTHO05D000167 2.3e-12 75.5 83 36.1
Lj2C969T7 Lonicera japonica HOM05D000003 ORTHO05D000004 1.9e-11 72.4 83 32.5
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 5.6e-11 70.9 63 42.9
Lj2P545T25 Lonicera japonica HOM05D057521 ORTHO05D025757 7.3e-11 70.5 68 42.6
Lj6P43T37 Lonicera japonica HOM05D000003 ORTHO05D000004 7.3e-11 70.5 82 39.0
Lj2P267T18 Lonicera japonica HOM05D000003 ORTHO05D000167 3.6e-10 68.2 60 43.3
Lj3P442T6 Lonicera japonica HOM05D000003 ORTHO05D000004 3.6e-10 68.2 82 37.8
Lj3C1061G3 Lonicera japonica HOM05D000434 ORTHO05D001445 4.8e-10 67.8 79 32.9
Lj6P349T18 Lonicera japonica HOM05D000003 ORTHO05D000004 1.4e-09 66.2 86 34.9
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 4.0e-09 64.7 79 30.4
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 6.9e-09 63.9 79 30.4
Lj2P945T11 Lonicera japonica HOM05D021412 ORTHO05D000167 1.2e-08 63.2 81 30.9
Lj8C26T8 Lonicera japonica HOM05D000003 ORTHO05D000004 1.2e-08 63.2 68 41.2
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-08 62.8 82 32.9
Lj9P485T48 Lonicera japonica HOM05D018958 ORTHO05D000167 1.5e-08 62.8 82 35.4
Lj6A354G19 Lonicera japonica HOM05D018958 ORTHO05D000167 2.0e-08 62.4 86 31.4
Lj1C222T2 Lonicera japonica HOM05D000003 ORTHO05D000004 3.4e-08 61.6 87 32.2
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-08 61.2 82 31.7
Lj2C80T6 Lonicera japonica HOM05D021412 ORTHO05D000167 7.6e-08 60.5 61 42.6
Lj6P694T36 Lonicera japonica HOM05D021412 ORTHO05D000167 7.6e-08 60.5 57 43.9
CANSAT21G2614 Cannabis sativa HOM05D000003 ORTHO05D000167 9.9e-08 60.1 82 28.0
Lj4P801T19 Lonicera japonica HOM05D000003 ORTHO05D000004 9.9e-08 60.1 84 27.4
CANSAT01G1104 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-07 58.9 82 28.0
CANSAT21G2540 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-07 58.9 82 28.0
Lj2P447T23 Lonicera japonica HOM05D014440 ORTHO05D000167 2.2e-07 58.9 79 32.9
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.2e-07 58.9 79 32.9
CANSAT64G2500 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-07 58.5 82 28.0
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.9e-07 58.5 88 28.4
CANSAT21G0177 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-07 57.8 81 29.6
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 6.4e-07 57.4 79 32.9
Aa31sc773G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.4e-07 57.0 88 35.2
CANSAT80G1540 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-07 57.0 82 28.0
Lj8P222T10 Lonicera japonica HOM05D014440 ORTHO05D000167 8.4e-07 57.0 80 33.8
CANSAT64G0029 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 56.6 82 30.5
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 56.6 82 30.5
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 1.1e-06 56.6 79 31.6
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 56.2 82 28.0
CANSAT21G2025 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 56.2 82 30.5
RcHm_v2.0_Chr3g0481921 Rosa chinensis HOM05D000003 ORTHO05D000004 1.4e-06 56.2 59 37.3
Manes.15G185801 Manihot esculenta HOM05D000003 ORTHO05D000167 1.9e-06 55.8 76 34.2
CANSAT11G1896 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-06 55.5 85 35.3
Lj7C739T7 Lonicera japonica HOM05D000040 ORTHO05D001305 2.4e-06 55.5 58 34.5
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 55.1 79 29.1
CANSAT25G0899 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-06 55.1 92 29.3
Lj7C484T13 Lonicera japonica HOM05D000003 ORTHO05D000167 3.2e-06 55.1 72 31.9
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 3.2e-06 55.1 85 30.6
CANSAT56G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-06 54.7 82 25.6
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-06 54.7 78 26.9
Lj2P99T51 Lonicera japonica HOM05D014440 ORTHO05D000167 4.2e-06 54.7 69 33.3
Lj7P99T38 Lonicera japonica HOM05D014440 ORTHO05D000167 4.2e-06 54.7 81 25.9
Lj8C245T10 Lonicera japonica HOM05D000003 ORTHO05D000167 4.2e-06 54.7 72 34.7
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-06 54.3 82 29.3
PSO478G2815 Papaver somniferum HOM05D000003 ORTHO05D001026 5.4e-06 54.3 82 32.9
CANSAT78G2409 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 53.9 82 28.0
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.5 82 26.8
CANSAT11G2606 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.5 82 24.4
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.5 82 29.3
CANSAT64G0189 Cannabis sativa HOM05D000003 ORTHO05D000004 9.3e-06 53.5 82 29.3
CANSAT80G1560 Cannabis sativa HOM05D000003 ORTHO05D000004 9.3e-06 53.5 82 25.6
FvH4_3g02851 Fragaria vesca HOM05D013659 ORTHO05D012679 9.3e-06 53.5 60 35.0


User provided reference genes

Program Settings