Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P495T8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-37 159.1 78 100.0
Lj3A493G26 Lonicera japonica HOM05D000264 ORTHO05D000152 3.1e-37 157.9 78 98.7
Lj3A491T20 Lonicera japonica HOM05D000264 ORTHO05D000152 2.6e-36 154.8 78 97.4
Lj3A465G35 Lonicera japonica HOM05D000264 ORTHO05D000152 1.0e-35 152.9 78 94.9
Lj3A465G34 Lonicera japonica HOM05D000264 ORTHO05D000152 2.9e-35 151.4 78 94.9
Lj3C493G8 Lonicera japonica HOM05D000264 ORTHO05D000152 2.9e-35 151.4 78 94.9
Lj3C494G1 Lonicera japonica HOM05D000264 ORTHO05D000152 8.5e-35 149.8 77 94.8
Lj3C489G7 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-34 149.1 78 93.6
Lj3A489T26 Lonicera japonica HOM05D000264 ORTHO05D000152 2.5e-34 148.3 78 92.3
Lj3C490G4 Lonicera japonica HOM05D000264 ORTHO05D000152 2.7e-33 144.8 78 92.3
Lj3P491T16 Lonicera japonica HOM05D000264 ORTHO05D000152 4.0e-32 141.0 78 88.5
Lj3P465T28 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-24 115.2 67 82.1
Lj3A793T36 Lonicera japonica HOM05D000264 ORTHO05D000152 6.8e-24 113.6 74 73.0
Lj3C487G1 Lonicera japonica HOM05D000264 ORTHO05D000152 4.9e-22 107.5 56 92.9
Lj3C462G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-21 105.9 56 91.1
Lj3A466T17 Lonicera japonica HOM05D000264 ORTHO05D000152 4.1e-21 104.4 53 96.2
Lj3A488T25 Lonicera japonica HOM05D000264 ORTHO05D000152 4.1e-21 104.4 56 89.3
Lj3A790G27 Lonicera japonica HOM05D000264 ORTHO05D000152 2.8e-17 91.7 72 61.1
Lj3C788T5 Lonicera japonica HOM05D000264 ORTHO05D000152 4.7e-17 90.9 72 61.1
Lj5C330G1 Lonicera japonica HOM05D000264 ORTHO05D000152 3.0e-16 88.2 71 60.6
Lj3C560G2 Lonicera japonica HOM05D000264 ORTHO05D000152 6.8e-16 87.0 72 58.3
Lj3A783G51 Lonicera japonica HOM05D000264 ORTHO05D000152 1.2e-15 86.3 72 58.3
Lj5A330G31 Lonicera japonica HOM05D000264 ORTHO05D000152 1.2e-15 86.3 71 60.6
Lj3A787T47 Lonicera japonica HOM05D000264 ORTHO05D000152 2.0e-15 85.5 72 58.3
Lj3C788T7 Lonicera japonica HOM05D000264 ORTHO05D000152 2.0e-15 85.5 72 58.3
Lj3P792T15 Lonicera japonica HOM05D000264 ORTHO05D000152 2.0e-15 85.5 77 49.4
Lj3A661G20 Lonicera japonica HOM05D000264 ORTHO05D000152 2.6e-15 85.1 78 48.7
Lj3A383T15 Lonicera japonica HOM05D000264 ORTHO05D000152 7.5e-15 83.6 78 53.8
Lj5A331T37 Lonicera japonica HOM05D000264 ORTHO05D000152 7.5e-15 83.6 71 59.2
Lj3A783G54 Lonicera japonica HOM05D000264 ORTHO05D000152 9.8e-15 83.2 72 55.6
Lj3P789T18 Lonicera japonica HOM05D000264 ORTHO05D000152 1.7e-14 82.4 78 46.2
Lj5A329T14 Lonicera japonica HOM05D000264 ORTHO05D000152 2.2e-14 82.0 71 57.7
Lj5A330T28 Lonicera japonica HOM05D000264 ORTHO05D000152 2.2e-14 82.0 71 59.2
Lj3A780G47 Lonicera japonica HOM05D000264 ORTHO05D000152 2.9e-14 81.6 78 44.9
Lj3A670G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-13 79.3 79 44.3
Lj3C783T8 Lonicera japonica HOM05D030704 ORTHO05D000152 1.8e-13 79.0 72 54.2
Lj3C791G0 Lonicera japonica HOM05D000264 ORTHO05D000152 3.2e-13 78.2 74 47.3
Lj3A783G53 Lonicera japonica HOM05D000264 ORTHO05D000152 4.1e-13 77.8 64 60.9
Lj3A782T27 Lonicera japonica HOM05D000264 ORTHO05D000152 9.2e-13 76.6 72 54.2
Lj3A789G30 Lonicera japonica HOM05D000264 ORTHO05D000152 1.2e-12 76.3 71 54.9
Lj3A718G91 Lonicera japonica HOM05D000264 ORTHO05D000152 1.6e-12 75.9 78 42.3
CSS0045785 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 4.6e-12 74.3 77 46.8
Lj3C790G3 Lonicera japonica HOM05D000264 ORTHO05D000152 5.9e-12 73.9 76 44.7
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 5.0e-11 70.9 77 46.8
Dinv44628 Davidia involucrata HOM05D000264 ORTHO05D000152 8.6e-11 70.1 77 44.2
Lj3C731T3 Lonicera japonica HOM05D000264 ORTHO05D000152 4.3e-10 67.8 70 48.6
Dinv14026 Davidia involucrata HOM05D000264 ORTHO05D000152 7.3e-10 67.0 71 46.5
Dinv14029 Davidia involucrata HOM05D000264 ORTHO05D000152 7.3e-10 67.0 71 46.5
Dinv14030 Davidia involucrata HOM05D000264 ORTHO05D000152 2.1e-09 65.5 71 45.1
Lj3C788T15 Lonicera japonica HOM05D000264 ORTHO05D000152 3.6e-09 64.7 60 53.3
Lj3A787G43 Lonicera japonica HOM05D000264 ORTHO05D000152 6.2e-09 63.9 57 49.1
Actinidia04482 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.0e-08 63.2 69 43.5
Actinidia08293 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.0e-08 63.2 69 43.5
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.3e-08 62.0 69 42.0
Dinv44624 Davidia involucrata HOM05D000264 ORTHO05D000152 2.3e-08 62.0 71 43.7
Lj3A784T13 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-08 62.0 54 55.6
Dinv03659 Davidia involucrata HOM05D000369 ORTHO05D000253 3.1e-08 61.6 72 38.9
Lj3A789T22 Lonicera japonica HOM05D000264 ORTHO05D000152 5.2e-08 60.8 45 66.7
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 6.8e-08 60.5 69 42.0
Lj3A788T32 Lonicera japonica HOM05D000264 ORTHO05D000152 6.8e-08 60.5 49 59.2
Rhsim04G0193100 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.5e-07 59.3 77 39.0
Dinv44626 Davidia involucrata HOM05D000264 ORTHO05D000152 2.0e-07 58.9 75 41.3
Lj6A647T16 Lonicera japonica HOM05D000264 ORTHO05D000152 2.0e-07 58.9 66 47.0
Lj3A730T42 Lonicera japonica HOM05D000264 ORTHO05D000152 2.6e-07 58.5 75 42.7
Dinv29923 Davidia involucrata HOM05D000264 ORTHO05D000152 3.4e-07 58.2 79 39.2
Lj3A780G48 Lonicera japonica HOM05D000264 ORTHO05D000152 3.4e-07 58.2 56 46.4
Lj3C792T0 Lonicera japonica HOM05D000264 ORTHO05D000152 3.4e-07 58.2 56 48.2
Lj6C648T1 Lonicera japonica HOM05D000264 ORTHO05D000152 3.4e-07 58.2 69 43.5
Cc11_g07820 Coffea canephora HOM05D000264 ORTHO05D000152 4.4e-07 57.8 72 43.1
Hma1.2p1_0893F.1_g233530 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.4e-07 57.8 79 39.2
Lj4A628G55 Lonicera japonica HOM05D000264 ORTHO05D000152 5.8e-07 57.4 55 45.5
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 7.5e-07 57.0 71 42.3
Hma1.2p1_1193F.1_g265650 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 7.5e-07 57.0 80 42.5
ECA233G1129 Erigeron canadensis HOM05D000264 ORTHO05D000152 9.8e-07 56.6 77 39.0
Lj6A649T19 Lonicera japonica HOM05D000264 ORTHO05D000152 9.8e-07 56.6 69 42.0
Rhsim04G0192800 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.3e-06 56.2 77 35.1
vmacro04094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.3e-06 56.2 77 32.5
Dinv14085 Davidia involucrata HOM05D000264 ORTHO05D000152 2.2e-06 55.5 110 30.0
Dinv29926 Davidia involucrata HOM05D000264 ORTHO05D000152 2.2e-06 55.5 110 30.0
DCAR_005092 Daucus carota HOM05D000264 ORTHO05D000152 2.9e-06 55.1 77 35.1
Dinv09002 Davidia involucrata HOM05D000264 ORTHO05D000152 2.9e-06 55.1 66 40.9
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 2.9e-06 55.1 80 40.0
Hma1.2p1_1276F.1_g272220 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.9e-06 55.1 80 41.2
CSS0002954 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.7e-06 54.7 66 45.5
Hma1.2p1_1193F.1_g265570 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.7e-06 54.7 77 44.2
Lj6A2T20 Lonicera japonica HOM05D000264 ORTHO05D000152 4.9e-06 54.3 69 40.6
CSS0044717 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 8.3e-06 53.5 66 45.5
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 8.3e-06 53.5 80 40.0
Lj7A209T40 Lonicera japonica HOM05D000264 ORTHO05D000152 8.3e-06 53.5 31 77.4
Rhsim04G0045700 Rhododendron simsii HOM05D000458 ORTHO05D000013 8.3e-06 53.5 77 33.8
Rhsim05G0056400 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.3e-06 53.5 77 33.8


User provided reference genes

Program Settings