Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 1.1e-47 193.0 95 100.0
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 1.1e-47 193.0 95 100.0
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 1.1e-28 129.8 85 75.3
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 2.3e-26 122.1 92 68.5
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 1.3e-24 116.3 85 67.1
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 2.4e-23 112.1 94 63.8
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 2.7e-14 82.0 93 47.3
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 7.7e-14 80.5 93 47.3
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 1.3e-08 63.2 75 45.3
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 1.3e-08 63.2 75 45.3
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 1.7e-08 62.8 75 42.7
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 8.3e-08 60.5 75 41.3
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 1.1e-07 60.1 75 40.0
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 3.1e-07 58.5 75 40.0
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-07 58.5 86 36.0
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-07 58.2 86 31.4
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-07 58.2 81 39.5
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 5.4e-07 57.8 75 37.3
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 5.4e-07 57.8 77 37.7
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 7.0e-07 57.4 72 43.1
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 9.2e-07 57.0 75 40.0
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-06 56.6 95 33.7
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-06 56.6 94 34.0
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 1.6e-06 56.2 72 43.1
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-06 55.8 81 35.8
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-06 55.8 80 35.0
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 3.5e-06 55.1 75 40.0
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-06 55.1 81 33.3
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-06 55.1 77 36.4
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-06 55.1 86 34.9
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 4.5e-06 54.7 94 34.0
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 4.5e-06 54.7 94 33.0
Sopen04g002380 Solanum pennellii HOM05D000005 ORTHO05D000012 4.5e-06 54.7 77 35.1
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-06 54.3 78 35.9
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-06 54.3 85 37.6


User provided reference genes

Program Settings