Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 5.1e-41 170.6 85 100.0
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 2.1e-34 148.7 82 90.2
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 2.6e-29 131.7 85 75.3
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 2.6e-29 131.7 85 75.3
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 7.6e-29 130.2 85 75.3
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 2.1e-26 122.1 85 71.8
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 1.1e-16 89.7 85 51.8
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 1.9e-16 89.0 85 51.8
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 9.4e-11 70.1 75 46.7
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 1.6e-10 69.3 75 48.0
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-10 69.3 81 38.3
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 4.6e-10 67.8 75 49.3
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 4.6e-10 67.8 75 49.3
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 7.9e-10 67.0 75 45.3
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 1.0e-09 66.6 75 46.7
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-09 66.6 83 36.1
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 1.9e-08 62.4 75 41.3
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 3.3e-08 61.6 72 45.8
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 3.3e-08 61.6 75 44.0
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 7.4e-08 60.5 75 44.0
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 7.4e-08 60.5 80 35.0
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 9.7e-08 60.1 72 45.8
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-07 59.3 83 34.9
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-07 58.9 83 32.5
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-07 58.5 82 34.1
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-07 58.5 83 32.5
Lj1C229G2 Lonicera japonica HOM05D000005 ORTHO05D017002 4.8e-07 57.8 85 36.5
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-07 57.8 83 31.3
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 6.3e-07 57.4 82 32.9
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-07 57.4 83 32.5
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 8.2e-07 57.0 83 32.5
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-06 56.6 83 34.9
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-06 56.6 80 32.5
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-06 56.6 77 32.5
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-06 56.2 82 32.9
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-06 56.2 83 32.5
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-06 55.8 83 34.9
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-06 55.8 85 34.1
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-06 55.5 83 32.5
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-06 55.5 80 33.8
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-06 55.5 83 32.5
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-06 55.5 83 31.3
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-06 55.1 84 31.0
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-06 55.1 83 32.5
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-06 55.1 84 33.3
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-06 54.7 83 32.5
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-06 54.7 82 32.9
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 5.3e-06 54.3 82 35.4
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 5.3e-06 54.3 80 32.5
Eucgr.C01928 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.9e-06 53.9 75 34.7
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-06 53.9 82 31.7
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 9.1e-06 53.5 80 27.5
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 9.1e-06 53.5 75 36.0
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 9.1e-06 53.5 80 31.2


User provided reference genes

Program Settings