Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 4.8e-35 150.6 75 100.0
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 6.3e-27 123.6 75 81.3
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.4e-26 122.5 75 81.3
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.4e-26 122.5 73 82.2
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 80.8
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.8e-26 122.1 73 82.2
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 2.4e-26 121.7 73 82.2
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 80.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 82.2
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 82.2
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 4.1e-26 120.9 73 82.2
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 5.3e-26 120.6 73 80.8
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 5.3e-26 120.6 75 80.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 5.3e-26 120.6 73 80.8
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 5.3e-26 120.6 73 80.8
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 79.5
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 79.5
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 80.8
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 80.8
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 80.8
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 80.8
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 7.0e-26 120.2 73 80.8
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 7.0e-26 120.2 73 80.8
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 9.1e-26 119.8 73 80.8
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 9.1e-26 119.8 73 79.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 9.1e-26 119.8 73 79.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 9.1e-26 119.8 73 79.5
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 9.1e-26 119.8 73 79.5
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 9.1e-26 119.8 73 79.5
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.2e-25 119.4 73 79.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.2e-25 119.4 73 79.5
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.2e-25 119.4 73 80.8
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 78.1
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.5e-25 119.0 73 79.5
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 2.0e-25 118.6 73 78.1
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.0e-25 118.6 73 78.1
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 2.6e-25 118.2 73 76.7
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 2.6e-25 118.2 73 78.1
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.6e-25 118.2 73 79.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.6e-25 118.2 73 78.1
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.6e-25 118.2 73 79.5
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.6e-25 118.2 75 76.0
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 3.5e-25 117.9 73 78.1
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 4.5e-25 117.5 73 76.7
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 7.7e-25 116.7 73 76.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.3e-24 115.9 73 76.7
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.3e-24 115.9 73 76.7
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.3e-24 115.9 73 76.7
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.3e-24 115.9 73 78.1
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.2e-24 115.2 73 78.1
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 2.9e-24 114.8 73 78.1
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.9e-24 114.8 79 75.9
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.9e-24 114.8 79 75.9
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 3.8e-24 114.4 73 75.3
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 8.5e-24 113.2 75 74.7
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.1e-23 112.8 73 72.6
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 2.5e-23 111.7 73 76.7
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 4.2e-23 110.9 86 68.6
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 4.2e-23 110.9 86 68.6
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 7.2e-23 110.2 73 72.6
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 7.2e-23 110.2 93 64.5
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 9.4e-23 109.8 73 75.3
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-22 109.0 73 76.7
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 3.6e-22 107.8 75 66.7
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.3e-19 99.4 113 54.0
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.3e-19 99.4 62 77.4
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.8e-19 98.2 62 75.8
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 4.8e-19 97.4 67 74.6
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.8e-18 95.5 69 68.1
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.8e-18 95.5 74 67.6
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 2.6e-17 91.7 55 80.0
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 5.9e-17 90.5 55 78.2
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 3.2e-15 84.7 74 55.4
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 3.0e-13 78.2 70 54.3
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.4e-12 74.3 44 77.3
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 5.7e-12 73.9 44 75.0
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 2.2e-11 72.0 44 72.7
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 3.7e-11 71.2 44 72.7
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 3.7e-11 71.2 44 72.7
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 5.0e-08 60.8 73 52.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.1e-07 59.7 75 50.7
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.1e-07 59.7 73 50.7
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 9.4e-07 56.6 61 59.0
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 2.1e-06 55.5 73 46.6
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 8.0e-06 53.5 34 70.6


User provided reference genes

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