Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 2.9e-48 194.9 97 100.0
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 3.1e-34 148.3 97 77.3
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.0e-18 94.7 91 50.5
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.2e-16 89.0 91 48.4
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 6.0e-14 80.9 90 44.4
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.0e-13 80.1 87 47.1
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-13 79.0 86 43.0
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.0e-13 78.6 85 42.4
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.1e-13 77.8 92 43.5
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 6.7e-13 77.4 90 41.1
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 8.7e-13 77.0 92 40.2
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 1.9e-12 75.9 87 37.9
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 1.9e-12 75.9 90 40.0
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 1.9e-12 75.9 50 76.0
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.3e-12 74.7 91 44.0
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 4.3e-12 74.7 86 43.0
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.7e-12 74.3 92 40.2
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.4e-12 73.9 85 41.2
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.7e-12 73.6 85 42.4
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.7e-12 73.6 85 41.2
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.3e-11 73.2 85 41.2
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.2e-11 72.4 86 43.0
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 2.2e-11 72.4 71 49.3
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-11 72.4 90 41.1
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 4.8e-11 71.2 85 38.8
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.3e-11 70.9 91 39.6
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.3e-11 70.9 92 38.0
Lj1P880T38 Lonicera japonica HOM05D008183 ORTHO05D007254 8.2e-11 70.5 86 40.7
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-10 69.7 90 38.9
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-10 69.7 85 41.2
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.4e-10 68.9 90 38.9
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.1e-10 68.6 92 38.0
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.3e-10 67.8 90 37.8
Lj5A712T32 Lonicera japonica HOM05D003297 ORTHO05D004027 6.9e-10 67.4 77 45.5
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.0e-10 67.0 85 38.8
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.0e-10 67.0 81 40.7
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.4e-09 65.1 81 39.5
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.4e-09 65.1 81 39.5
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.5e-09 64.7 91 40.7
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.9e-09 64.3 79 35.4
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 7.6e-09 63.9 83 37.3
Lj1P1006T30 Lonicera japonica HOM05D008183 ORTHO05D007254 1.0e-08 63.5 75 40.0
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 1.0e-08 63.5 83 37.3
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 1.3e-08 63.2 89 40.4
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.7e-08 62.8 79 38.0
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 1.7e-08 62.8 83 38.6
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.2e-08 62.4 81 39.5
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.2e-08 62.4 93 40.9
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.0e-08 61.2 85 31.8
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 6.5e-08 60.8 82 35.4
FvH4_4g25931 Fragaria vesca HOM05D011624 ORTHO05D014221 8.5e-08 60.5 89 39.3
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-07 59.7 77 39.0
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 1.9e-07 59.3 65 44.6
Sc19g0003070 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.9e-07 59.3 81 42.0
Lj9P695T39 Lonicera japonica HOM05D008183 ORTHO05D007254 2.5e-07 58.9 73 39.7
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 2.5e-07 58.9 61 45.9
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.5e-07 58.9 61 42.6
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 3.2e-07 58.5 43 72.1
Eucgr.C01564 Eucalyptus grandis HOM05D008183 ORTHO05D007254 7.2e-07 57.4 75 33.3
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.3e-07 57.0 73 38.4
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-06 56.6 86 41.9
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-06 56.6 99 40.4
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 1.2e-06 56.6 94 37.2
Lj3A1052T27 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-06 55.8 65 43.1
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.1e-06 55.8 77 36.4
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.7e-06 55.5 90 38.9
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.7e-06 55.5 90 38.9
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 6.1e-06 54.3 51 54.9
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 7.9e-06 53.9 86 37.2


User provided reference genes

Program Settings