Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P262T7 Lonicera japonica HOM05D000593 ORTHO05D000562 1.2e-64 249.6 120 100.0
Lj5P603T32 Lonicera japonica HOM05D000593 ORTHO05D000562 4.0e-60 234.6 119 93.3
Lj4P0T9 Lonicera japonica HOM05D000593 ORTHO05D000562 2.8e-53 211.8 119 83.2
Lj8P301T8 Lonicera japonica HOM05D000593 ORTHO05D000562 5.7e-46 187.6 94 93.6
Lju110P2T4 Lonicera japonica HOM05D000593 ORTHO05D000562 2.2e-45 185.7 94 92.6
Lj3P1076T27 Lonicera japonica HOM05D000593 ORTHO05D000562 2.6e-35 152.1 81 87.7
Lj1P707T7 Lonicera japonica HOM05D000593 ORTHO05D000562 6.7e-31 137.5 104 67.3
Lju3020P0T10 Lonicera japonica HOM05D000593 ORTHO05D000562 1.7e-29 132.9 104 64.4
Hma1.2p1_0353F.1_g133160 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 9.7e-22 107.1 117 45.3
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.3e-21 106.7 119 41.2
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 1.7e-21 106.3 124 41.1
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 1.7e-21 106.3 111 44.1
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 8.3e-21 104.0 124 40.3
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 5.3e-20 101.3 111 43.2
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 9.1e-20 100.5 117 43.6
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 2.7e-19 99.0 111 43.2
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 1.0e-18 97.1 111 42.3
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.3e-18 96.7 117 41.0
Hma1.2p1_0319F.1_g123940 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.8e-18 95.1 117 41.0
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.1e-17 93.6 119 40.3
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-17 93.6 118 38.1
PSO541G2752 Papaver somniferum HOM05D000593 ORTHO05D000562 1.9e-17 92.8 101 43.6
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 2.5e-17 92.4 121 38.8
PSO541G4860 Papaver somniferum HOM05D000593 ORTHO05D000562 2.5e-17 92.4 97 42.3
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.5e-17 92.4 118 37.3
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 4.2e-17 91.7 120 40.0
PSO675G6516 Papaver somniferum HOM05D000593 ORTHO05D000562 4.2e-17 91.7 97 42.3
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 1.2e-16 90.1 117 36.8
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 1.6e-16 89.7 120 40.8
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-16 89.4 101 41.6
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.1e-16 89.4 119 37.8
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.6e-16 88.6 119 37.8
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-16 88.2 101 40.6
PSO675G4622 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-16 88.2 101 40.6
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 6.1e-16 87.8 108 40.7
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.0e-16 87.4 119 37.0
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.0e-15 87.0 119 37.0
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.0e-15 87.0 122 40.2
PSO063G7449 Papaver somniferum HOM05D000593 ORTHO05D000562 1.0e-15 87.0 97 41.2
Ca_06057_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.8e-15 86.3 122 40.2
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.8e-15 86.3 120 35.8
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.3e-15 85.9 118 38.1
PSO782G4983 Papaver somniferum HOM05D000593 ORTHO05D000562 2.3e-15 85.9 101 39.6
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 3.0e-15 85.5 122 40.2
PSO063G7547 Papaver somniferum HOM05D000593 ORTHO05D000562 3.0e-15 85.5 101 39.6
PSO591G0063 Papaver somniferum HOM05D000593 ORTHO05D000562 3.0e-15 85.5 103 36.9
PSO063G3477 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-15 85.1 97 40.2
PSO541G6383 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-15 85.1 98 38.8
PSO832G1919 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-15 85.1 97 40.2
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.2e-15 84.7 119 36.1
PSO832G3255 Papaver somniferum HOM05D000593 ORTHO05D000562 5.2e-15 84.7 103 35.9
PSO675G4112 Papaver somniferum HOM05D000593 ORTHO05D000562 6.8e-15 84.3 98 38.8
PSO832G2496 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-14 83.6 97 40.2
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 1.2e-14 83.6 121 38.0
Ca_15677_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.0e-14 82.8 122 39.3
FvH4_3g04011 Fragaria vesca HOM05D000593 ORTHO05D000562 2.0e-14 82.8 114 37.7
Aqoxy1G03120 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.6e-14 82.4 119 37.0
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-14 82.4 119 35.3
TWI12G0007 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.6e-14 82.4 118 33.1
Ca_25222_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 3.4e-14 82.0 121 39.7
Ca_13605_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 7.5e-14 80.9 122 38.5
TWI12G1095 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.5e-14 80.9 118 32.2
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 1.7e-13 79.7 115 33.0
TWI56G1041 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-13 79.3 120 32.5
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 4.8e-13 78.2 121 36.4
PSO063G1358 Papaver somniferum HOM05D000593 ORTHO05D000562 6.3e-13 77.8 119 34.5
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.1e-12 77.0 96 42.7
TWI32G0102 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.4e-12 76.6 118 34.7
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.8e-12 76.3 119 35.3
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 2.4e-12 75.9 96 34.4
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-12 75.9 118 31.4
Lj9C298T5 Lonicera japonica HOM05D000593 ORTHO05D000562 3.1e-12 75.5 61 57.4
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 4.1e-12 75.1 103 36.9
PSO386G0280 Papaver somniferum HOM05D000593 ORTHO05D000562 4.1e-12 75.1 104 33.7
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 5.4e-12 74.7 107 37.4
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.4e-12 74.7 118 34.7
TWI75G0252 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.4e-12 74.7 120 30.0
EL10Ac2g02647 Beta vulgaris HOM05D000593 ORTHO05D000562 7.0e-12 74.3 126 30.2
PSO386G0211 Papaver somniferum HOM05D000593 ORTHO05D000562 7.0e-12 74.3 104 33.7
TWI63G1393 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.0e-12 74.3 105 35.2
Aqoxy2G01272 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.2e-11 73.6 105 35.2
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-11 73.6 111 36.0
TWI75G0592 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-11 73.6 116 31.0
TWI79G0990 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-11 73.2 109 34.9
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 2.7e-11 72.4 126 29.4
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.7e-11 72.4 118 33.1
PSO724G1093 Papaver somniferum HOM05D000593 ORTHO05D000562 3.5e-11 72.0 102 33.3
TWI36G0901 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.9e-11 71.2 102 36.3
TWI09G0669 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.7e-11 70.9 116 30.2
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.7e-11 70.9 99 36.4
TWI15G0719 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.0e-10 68.2 116 31.0
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.6e-10 67.4 57 50.9
Ca_02694_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 8.6e-10 67.4 101 37.6
TAR485G0003 Trochodendron aralioides HOM05D003216 ORTHO05D002268 1.5e-09 66.6 120 25.0
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 3.3e-09 65.5 120 32.5
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 3.3e-09 65.5 118 32.2
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.3e-09 65.5 118 32.2
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 4.2e-09 65.1 124 35.5
PSO541G3362 Papaver somniferum HOM05D000593 ORTHO05D000562 4.2e-09 65.1 93 31.2
TWI75G1081 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.2e-09 65.1 61 44.3
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.5e-09 64.7 118 31.4
Ca_07719_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 7.2e-09 64.3 110 35.5
Ca_23377_v3 Cicer arietinum L. HOM05D000593 ORTHO05D002268 7.2e-09 64.3 120 35.0
SGA_v2.0_scaffold1233G53877 Striga asiatica HOM05D000593 ORTHO05D000562 7.2e-09 64.3 111 33.3
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 7.2e-09 64.3 111 33.3
Ca_26997_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 9.5e-09 63.9 74 44.6
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 9.5e-09 63.9 108 28.7
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.2e-08 63.5 101 36.6
vmacro11285 Vaccinium macrocarpon HOM05D000040 ORTHO05D000562 1.2e-08 63.5 108 28.7
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 2.1e-08 62.8 83 42.2
PSO585G0009 Papaver somniferum HOM05D000593 ORTHO05D000562 2.1e-08 62.8 78 39.7
Ca_01383_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.8e-08 62.4 110 34.5
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-08 62.4 108 33.3
Medtr2g023140 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-08 62.4 108 36.1
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-08 62.4 118 30.5
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.8e-08 62.4 102 32.4
Aqoxy7G02031 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 3.6e-08 62.0 108 32.4
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 3.6e-08 62.0 57 45.6
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.6e-08 62.0 90 35.6
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 4.7e-08 61.6 106 32.1
PSO170G3669 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-08 61.6 118 30.5
PSO210G6708 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-08 61.6 85 30.6
PSO729G0158 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-08 61.6 118 30.5
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.7e-08 61.6 102 32.4
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 4.7e-08 61.6 108 27.8
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.0e-08 60.8 51 49.0
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 2.3e-07 59.3 118 31.4
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-07 58.5 108 32.4
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 4.0e-07 58.5 71 42.3
vmacro10473 Vaccinium macrocarpon HOM05D000593 ORTHO05D000562 4.0e-07 58.5 108 29.6
vmacro10577 Vaccinium macrocarpon HOM05D001714 ORTHO05D001932 6.8e-07 57.8 108 27.8
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-06 56.6 109 37.6
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-06 56.6 106 30.2
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-06 56.6 117 28.2
TWI59G1113 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-06 56.6 117 28.2
vmacro10973 Vaccinium macrocarpon HOM05D000593 ORTHO05D000562 1.5e-06 56.6 98 30.6
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 2.0e-06 56.2 61 41.0
Medtr1g036180 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-06 56.2 98 37.8
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-06 55.8 99 32.3
ECA238G3256 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.4e-06 55.5 108 29.6
HanXRQChr05g0151291 Helianthus annuus HOM05D000593 ORTHO05D000562 3.4e-06 55.5 104 26.0
HanXRQChr17g0552941 Helianthus annuus HOM05D000593 ORTHO05D000562 3.4e-06 55.5 104 26.0
TWI38G2130 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.4e-06 55.1 117 28.2
ECA233G1430 Erigeron canadensis HOM05D000593 ORTHO05D000562 5.7e-06 54.7 120 25.0
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.5e-06 54.3 93 29.0
ECA233G1851 Erigeron canadensis HOM05D000593 ORTHO05D000562 9.8e-06 53.9 106 30.2


User provided reference genes

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