Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P248T8 Lonicera japonica HOM05D007424 ORTHO05D001748 6.2e-64 247.3 123 100.0
Lj3A242T42 Lonicera japonica HOM05D007424 ORTHO05D001748 1.3e-34 149.8 114 71.9
Lj3P253T5 Lonicera japonica HOM05D000005 ORTHO05D001748 5.6e-33 144.4 92 76.1
Lj3P262T8 Lonicera japonica HOM05D000005 ORTHO05D001748 5.6e-33 144.4 92 76.1
Lj3A247T22 Lonicera japonica HOM05D007424 ORTHO05D001748 1.3e-32 143.3 104 72.1
Lj3A256T9 Lonicera japonica HOM05D000005 ORTHO05D001748 4.0e-31 138.3 94 76.6
Lj3P250T6 Lonicera japonica HOM05D000005 ORTHO05D001748 6.9e-31 137.5 87 78.2
Lj3C243T3 Lonicera japonica HOM05D000005 ORTHO05D001748 2.6e-30 135.6 83 78.3
Lj3A247T21 Lonicera japonica HOM05D007424 ORTHO05D001748 1.0e-29 133.7 84 77.4
Lj3C254T7 Lonicera japonica HOM05D007424 ORTHO05D001748 3.8e-29 131.7 104 66.3
Lj3C251T2 Lonicera japonica HOM05D000005 ORTHO05D001748 4.9e-29 131.3 83 78.3
Lj3C243G5 Lonicera japonica HOM05D000005 ORTHO05D001748 8.4e-29 130.6 106 67.9
Lj3A252T10 Lonicera japonica HOM05D007424 ORTHO05D001748 4.2e-28 128.3 83 75.9
Lj3P243T8 Lonicera japonica HOM05D000005 ORTHO05D001748 9.3e-28 127.1 85 71.8
Lj3A251T21 Lonicera japonica HOM05D007424 ORTHO05D001748 1.2e-27 126.7 106 63.2
Lj3C250G3 Lonicera japonica HOM05D000005 ORTHO05D001748 1.2e-27 126.7 86 74.4
Lj3C253T4 Lonicera japonica HOM05D000005 ORTHO05D001748 1.6e-27 126.3 104 63.5
Lj3C244T4 Lonicera japonica HOM05D000005 ORTHO05D001748 3.5e-27 125.2 83 77.1
Lj3C249T3 Lonicera japonica HOM05D000005 ORTHO05D001748 1.8e-26 122.9 106 66.0
Lj3A244T22 Lonicera japonica HOM05D000005 ORTHO05D001748 1.1e-25 120.2 106 60.4
Lj3A255T14 Lonicera japonica HOM05D000005 ORTHO05D001748 7.4e-25 117.5 94 67.0
Lj3C246T0 Lonicera japonica HOM05D000005 ORTHO05D001748 2.8e-24 115.5 83 68.7
Lj3C248G2 Lonicera japonica HOM05D007424 ORTHO05D001748 6.5e-21 104.4 65 78.5
Lj4C428T6 Lonicera japonica HOM05D000005 ORTHO05D001748 7.2e-20 100.9 84 64.3
Lj4A427T8 Lonicera japonica HOM05D007424 ORTHO05D001748 8.2e-16 87.4 70 67.1
Lju279C4T4 Lonicera japonica HOM05D007424 ORTHO05D001748 7.7e-14 80.9 85 52.9
Lju432C6T7 Lonicera japonica HOM05D007424 ORTHO05D001748 2.2e-13 79.3 87 54.0
Cc08_g06840 Coffea canephora HOM05D000005 ORTHO05D000012 2.9e-13 79.0 109 41.3
Lju50A36T13 Lonicera japonica HOM05D007424 ORTHO05D001748 5.0e-13 78.2 84 52.4
Dinv01986 Davidia involucrata HOM05D000005 ORTHO05D000012 1.1e-12 77.0 102 40.2
Lj9A9T7 Lonicera japonica HOM05D007424 ORTHO05D001748 1.4e-12 76.6 88 50.0
Dinv20734 Davidia involucrata HOM05D000005 ORTHO05D000012 1.9e-12 76.3 102 39.2
Dinv22128 Davidia involucrata HOM05D000005 ORTHO05D000012 2.5e-12 75.9 98 41.8
Cc00_g25590 Coffea canephora HOM05D000005 ORTHO05D000012 3.2e-12 75.5 109 40.4
Lj9C10T0 Lonicera japonica HOM05D000005 ORTHO05D001748 3.2e-12 75.5 87 54.0
Lj9C13T7 Lonicera japonica HOM05D007424 ORTHO05D001748 3.2e-12 75.5 83 51.8
Lju2749C0G3 Lonicera japonica HOM05D007424 ORTHO05D001748 3.2e-12 75.5 84 52.4
Cc11_g00700 Coffea canephora HOM05D000005 ORTHO05D000012 2.1e-11 72.8 109 40.4
Lju432C3T4 Lonicera japonica HOM05D007424 ORTHO05D001748 2.7e-11 72.4 83 50.6
Dinv31501 Davidia involucrata HOM05D000005 ORTHO05D000012 3.6e-11 72.0 100 42.0
Lju50C35G4 Lonicera japonica HOM05D007424 ORTHO05D001748 4.7e-11 71.6 88 47.7
Lju110C5G13 Lonicera japonica HOM05D007424 ORTHO05D001748 7.9e-11 70.9 84 51.2
Lju50A38T17 Lonicera japonica HOM05D007424 ORTHO05D001748 7.9e-11 70.9 79 53.2
Lju50C43T0 Lonicera japonica HOM05D007424 ORTHO05D001748 7.9e-11 70.9 84 48.8
Lju279A3G14 Lonicera japonica HOM05D007424 ORTHO05D001748 1.0e-10 70.5 84 48.8
Lj3A250T14 Lonicera japonica HOM05D000005 ORTHO05D001748 1.4e-10 70.1 41 85.4
Dinv11663 Davidia involucrata HOM05D000005 ORTHO05D000012 3.0e-10 68.9 98 39.8
Lj9C54G3 Lonicera japonica HOM05D007424 ORTHO05D001748 3.0e-10 68.9 82 50.0
Lj9C60T0 Lonicera japonica HOM05D007424 ORTHO05D001748 3.0e-10 68.9 82 50.0
Dinv25475 Davidia involucrata HOM05D000005 ORTHO05D000012 6.7e-10 67.8 89 48.3
Lju170C5T1 Lonicera japonica HOM05D007424 ORTHO05D001748 8.8e-10 67.4 83 49.4
Lju279A1G13 Lonicera japonica HOM05D007424 ORTHO05D001748 8.8e-10 67.4 83 48.2
Lju110C4T1 Lonicera japonica HOM05D007424 ORTHO05D001748 1.5e-09 66.6 71 53.5
Cc00_g12710 Coffea canephora HOM05D000005 ORTHO05D000012 4.4e-09 65.1 80 40.0
Cc00_g19200 Coffea canephora HOM05D000005 ORTHO05D000012 4.4e-09 65.1 111 38.7
CSS0012221 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D009013 1.3e-08 63.5 86 46.5
Lju110C1T0 Lonicera japonica HOM05D007424 ORTHO05D001748 2.2e-08 62.8 83 47.0
Lju170C6G2 Lonicera japonica HOM05D007424 ORTHO05D001748 3.7e-08 62.0 77 51.9
Manes.10G128001 Manihot esculenta HOM05D000005 ORTHO05D001748 3.7e-08 62.0 96 42.7
PGSC0003DMG400006003 Solanum tuberosum HOM05D000005 ORTHO05D000012 3.7e-08 62.0 107 38.3
Lju50C48G2 Lonicera japonica HOM05D007424 ORTHO05D001748 4.8e-08 61.6 77 50.6
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 6.3e-08 61.2 80 46.2
arahy.Tifrunner.gnm1.ann1.D3GAX0 Arachis hypogaea HOM05D000005 ORTHO05D000012 8.2e-08 60.8 82 42.7
Dinv32052 Davidia involucrata HOM05D000005 ORTHO05D000012 8.2e-08 60.8 105 37.1
Lju634C0T0 Lonicera japonica HOM05D007424 ORTHO05D001748 8.2e-08 60.8 71 49.3
CSS0010161 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.1e-07 60.5 79 44.3
Dinv25474 Davidia involucrata HOM05D000005 ORTHO05D000012 1.1e-07 60.5 93 41.9
Oeu001180.1 Olea europaea HOM05D000005 ORTHO05D000012 1.1e-07 60.5 83 38.6
Sopen04g002380 Solanum pennellii HOM05D000005 ORTHO05D000012 1.1e-07 60.5 107 38.3
Cc00_g15130 Coffea canephora HOM05D000005 ORTHO05D000012 1.4e-07 60.1 107 36.4
Cc08_g06820 Coffea canephora HOM05D000005 ORTHO05D000012 1.4e-07 60.1 107 36.4
Cc08_g06850 Coffea canephora HOM05D000005 ORTHO05D000012 1.4e-07 60.1 109 35.8
Dinv25477 Davidia involucrata HOM05D000005 ORTHO05D000012 1.4e-07 60.1 70 48.6
Peaxi162Scf00177g01132 Petunia axillaris HOM05D000005 ORTHO05D001748 1.4e-07 60.1 84 38.1
Cc00_g23220 Coffea canephora HOM05D000005 ORTHO05D000012 2.4e-07 59.3 107 40.2
Lj7A417T45 Lonicera japonica HOM05D000005 ORTHO05D001748 2.4e-07 59.3 83 43.4
Lj7P426T44 Lonicera japonica HOM05D000005 ORTHO05D001748 2.4e-07 59.3 61 49.2
Lj9A11T9 Lonicera japonica HOM05D007424 ORTHO05D001748 2.4e-07 59.3 69 50.7
arahy.Tifrunner.gnm1.ann1.677PQ2 Arachis hypogaea HOM05D000005 ORTHO05D000012 4.1e-07 58.5 82 40.2
Lsat_1_v5_gn_2_11741 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-07 58.5 88 40.9
Lj7P419T36 Lonicera japonica HOM05D000005 ORTHO05D001748 4.1e-07 58.5 88 42.0
Solyc04g056570.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 4.1e-07 58.5 106 37.7
GSVIVG01022979001 Vitis vinifera HOM05D000005 ORTHO05D000012 4.1e-07 58.5 83 42.2
Lj7A418T44 Lonicera japonica HOM05D000005 ORTHO05D001748 5.3e-07 58.2 83 42.2
Lj9A12T11 Lonicera japonica HOM05D007424 ORTHO05D001748 7.0e-07 57.8 69 49.3
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 7.0e-07 57.8 70 48.6
CSS0027623 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.2e-06 57.0 101 39.6
CSS0032227 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.2e-06 57.0 87 41.4
CSS0043873 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.2e-06 57.0 87 41.4
Manes.10G126600 Manihot esculenta HOM05D000005 ORTHO05D000012 1.2e-06 57.0 96 39.6
Nn1g09534 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.2e-06 57.0 60 50.0
BolC1t05785H Brassica oleracea HOM05D000005 ORTHO05D000449 1.5e-06 56.6 65 49.2
CSS0035728 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.5e-06 56.6 100 40.0
Lju170A4G9 Lonicera japonica HOM05D007424 ORTHO05D001748 2.0e-06 56.2 74 47.3
Lju50C45T0 Lonicera japonica HOM05D007424 ORTHO05D001748 2.0e-06 56.2 70 47.1
Solyc07g055380.1 Solanum lycopersicum HOM05D000005 ORTHO05D000012 2.0e-06 56.2 88 36.4
BcaC07g38142 Brassica carinata HOM05D000005 ORTHO05D000449 2.6e-06 55.8 102 37.3
Lj9C4G0 Lonicera japonica HOM05D007424 ORTHO05D001748 2.6e-06 55.8 74 47.3
arahy.Tifrunner.gnm1.ann1.X3YUGG Arachis hypogaea HOM05D000005 ORTHO05D000012 3.4e-06 55.5 96 37.5
Lj7C417G11 Lonicera japonica HOM05D000001 ORTHO05D000003 3.4e-06 55.5 82 41.5
Potri.005G031101 Populus trichocarpa HOM05D000005 ORTHO05D023092 3.4e-06 55.5 70 42.9
BcaB08g34693 Brassica carinata HOM05D000005 ORTHO05D023687 4.5e-06 55.1 85 37.6
Lj3A254T21 Lonicera japonica HOM05D000005 ORTHO05D001748 4.5e-06 55.1 83 45.8
arahy.Tifrunner.gnm1.ann1.VFVG10 Arachis hypogaea HOM05D000005 ORTHO05D000012 5.9e-06 54.7 82 40.2
Manes.10G127975 Manihot esculenta HOM05D000005 ORTHO05D001748 5.9e-06 54.7 96 39.6
Sopen07g028980 Solanum pennellii HOM05D000005 ORTHO05D000012 5.9e-06 54.7 88 37.5
Manes.10G121812 Manihot esculenta HOM05D000005 ORTHO05D000012 7.7e-06 54.3 91 38.5


User provided reference genes

Program Settings